RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 CPVLQ9H3G5 476 aa13.28□□□□□ -0.28
PPME1-202ENST00000398427 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
PPME1-202ENST00000398427 RLFQ13129 1914 aa13.27□□□□□ -0.28
PPME1-202ENST00000398427 KIF20AO95235 890 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 GTF2A2P52657 109 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 GPATCH4Q5T3I0 446 aaKnown RBP13.27□□□□□ -0.29
PPME1-202ENST00000398427 NBPF11Q86T75 865 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 CCDC83Q8IWF9 413 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 PROCA1Q8NCQ7 364 aaPredicted RBP13.27□□□□□ -0.29
PPME1-202ENST00000398427 CCDC102AQ96A19 550 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 RPAP3Q9H6T3 665 aaPredicted RBP13.27□□□□□ -0.29
PPME1-202ENST00000398427 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.29
PPME1-202ENST00000398427 DTNBO60941 627 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 KIF5BP33176 963 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 GRM1Q13255 1194 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 SLC35G1Q2M3R5 365 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 BRI3BPQ8WY22 251 aa13.27□□□□□ -0.29
PPME1-202ENST00000398427 CCDC94Q9BW85 323 aaPredicted RBP13.27□□□□□ -0.29
PPME1-202ENST00000398427 R3HCC1Q9Y3T6 440 aaKnown RBP13.27□□□□□ -0.29
PPME1-202ENST00000398427 CCL15-CCL14A0A0B4J2E2 113 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 KLRF2D3W0D1 207 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 CETPP11597 493 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 NTRK3Q16288 839 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 CCL15Q16663 113 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 GPAT2Q6NUI2 795 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 ARID3AQ99856 593 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 FBXO28Q9NVF7 368 aa13.26□□□□□ -0.29
PPME1-202ENST00000398427 RBM28Q9NW13 759 aaKnown RBP13.26□□□□□ -0.29
PPME1-202ENST00000398427 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 SLC16A2P36021 539 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 FASTKD5Q7L8L6 764 aaKnown RBP13.25□□□□□ -0.29
PPME1-202ENST00000398427 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 SRBD1Q8N5C6 995 aaKnown RBP13.25□□□□□ -0.29
PPME1-202ENST00000398427 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
PPME1-202ENST00000398427 TANGO6Q9C0B7 1094 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 UBA5Q9GZZ9 404 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 AGTPBP1Q9UPW5 1226 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 CEP350Q5VT06 3117 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 UQCRHLA0A096LP55 91 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 CYTH3O43739 400 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 PPFIA3O75145 1194 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 UQCRHP07919 91 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 STAT2P52630 851 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 FUT2Q10981 343 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 CCDC82Q8N4S0 544 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 CAPNS2Q96L46 248 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 PPP1R9BQ96SB3 815 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 CNTNAP5Q8WYK1 1306 aa13.25□□□□□ -0.29
PPME1-202ENST00000398427 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
PPME1-202ENST00000398427 DYNC1I1O14576 645 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 CUL4AQ13619 759 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 ANP32BQ92688 251 aaKnown RBP13.24□□□□□ -0.29
PPME1-202ENST00000398427 PTPN18Q99952 460 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
PPME1-202ENST00000398427 VGLL3A8MV65 326 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 BTBD19C9JJ37 291 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 FLOT1O75955 427 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 GNAQP50148 359 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
PPME1-202ENST00000398427 BTNL9Q6UXG8 535 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 CATSPERGQ6ZRH7 1159 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 MYH6P13533 1939 aa13.24□□□□□ -0.29
PPME1-202ENST00000398427 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 CPLX1O14810 134 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 PLA2G6O60733 806 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 IFNAR1P17181 557 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 HOXA7P31268 230 aaPredicted RBP13.23□□□□□ -0.29
PPME1-202ENST00000398427 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
PPME1-202ENST00000398427 PHKBQ93100 1093 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 COL11A1P12107 1806 aaPredicted RBP13.23□□□□□ -0.29
PPME1-202ENST00000398427 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
PPME1-202ENST00000398427 JAK2O60674 1132 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 AOC2O75106 756 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 HSPA6P17066 643 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 NOGQ13253 232 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
PPME1-202ENST00000398427 ADGRF4Q8IZF3 695 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 SLF1Q9BQI6 1058 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 LZTS2Q9BRK4 669 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms