RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 TRIM61Q5EBN2 209 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 EFHC2Q5JST6 749 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 XP32Q5T750 250 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SAMD5Q5TGI4 173 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PIK3R6Q5UE93 754 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 CDCP2Q5VXM1 449 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 TDRD10Q5VZ19 366 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 CEP135Q66GS9 1140 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SCARA3Q6AZY7 606 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 CCDC174Q6PII3 467 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 LRFN4Q6PJG9 635 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 LYPD4Q6UWN0 246 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ADAMTSL4Q6UY14 1074 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 RAB44Q7Z6P3 723 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SRLQ86TD4 932 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 FCHSD1Q86WN1 690 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SKAP1Q86WV1 359 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZNF227Q86WZ6 799 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PHACTR4Q8IZ21 702 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 MICALL1Q8N3F8 863 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ACRBPQ8NEB7 543 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC7A14Q8TBB6 771 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PLPPR2Q96GM1 343 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 FUBP3Q96I24 572 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 WNK4Q96J92 1243 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 DHRS1Q96LJ7 313 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 MAGEB10Q96LZ2 347 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 FGD4Q96M96 766 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 NEUROD6Q96NK8 337 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 GAS2L1Q99501 681 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 POP1Q99575 1024 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SELENOOQ9BVL4 669 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 LGR4Q9BXB1 951 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 MTFR1LQ9H019 292 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 GBP3Q9H0R5 595 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 CRISPLD1Q9H336 500 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 IGFLR1Q9H665 355 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 CNNM2Q9H8M5 875 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 EFCC1Q9HA90 598 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 TRIM39Q9HCM9 518 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 NGRNQ9NPE2 291 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 NLRC4Q9NPP4 1024 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 DDX20Q9UHI6 824 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PNMA8BQ9ULN7 279 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PHTF1Q9UMS5 762 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 DMTF1Q9Y222 760 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 GIT1Q9Y2X7 761 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SNCAIPQ9Y6H5 919 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 MORC2Q9Y6X9 1032 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PRR36Q9H6K5 1346 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 DYTNA2CJ06 578 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 PRAMEF27A3QJZ7 478 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 CDC14CA4D256 554 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 CHURC1-FNTBB4DL54 471 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 B4E1Z4 1266 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 F5H423 210 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GFRA2O00451 464 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GAS7O60861 476 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 DNAJA2O60884 412 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 MAP3K6O95382 1288 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 IGHA1P01876 353 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 EPHX1P07099 455 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GSTP1P09211 210 aaKnown RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 BPIP17213 487 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GRIA2P42262 883 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 RECQLP46063 649 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 PMS1P54277 932 aaKnown RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 NRLP54845 237 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GEMIN4P57678 1058 aaKnown RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 RBM10P98175 930 aaKnown RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 SPEM2Q0P670 501 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 AP3B2Q13367 1082 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GTF2H3Q13889 308 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 CNGB1Q14028 1251 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 INPP5AQ14642 412 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 KCTD2Q14681 263 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC9A5Q14940 896 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 SKOR2Q2VWA4 1001 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 RGL3Q3MIN7 710 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 ATP13A4Q4VNC1 1196 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GPR158Q5T848 1215 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 PGM2L1Q6PCE3 622 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 FIGNL1Q6PIW4 674 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 TOGARAM2Q6ZUX3 1019 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 SV2AQ7L0J3 742 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 EPM2AIP1Q7L775 607 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 C11orf74Q86VG3 221 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 CCDC144CPQ8IYA2 1237 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 FAM186BQ8IYM0 893 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 STK11IPQ8N1F8 1099 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 NXPE1Q8N323 547 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 CPA6Q8N4T0 437 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 C1orf131Q8NDD1 294 aaKnown RBP2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 RNF217Q8TC41 542 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GPBAR1Q8TDU6 330 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 GJA10Q969M2 543 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 TRIM63Q969Q1 353 aa2.6□□□□□ -1.99
HMGN2P39-201ENST00000398005 OSBP2Q969R2 916 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms