RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 IFNAR1P17181 557 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 HOXA7P31268 230 aaPredicted RBP17.64■□□□□ 0.41
SUMO3-203ENST00000397898 HTRA3P83110 453 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L24Q0WX57 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 CATSPERGQ6ZRH7 1159 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 CHURC1Q8WUH1 139 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 TESPA1A2RU30 521 aaPredicted RBP17.63■□□□□ 0.41
SUMO3-203ENST00000397898 FLOT1O75955 427 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 CDKL5O76039 1030 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 SMARCA1P28370 1054 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 C1QTNF8P60827 252 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 FAM160B2Q86V87 743 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 NSUN7Q8NE18 718 aaKnown RBP17.63■□□□□ 0.41
SUMO3-203ENST00000397898 PHKBQ93100 1093 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 CAPNS2Q96L46 248 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 LLPHQ9BRT6 129 aaKnown RBP17.63■□□□□ 0.41
SUMO3-203ENST00000397898 SPZ1Q9BXG8 430 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 RIOX1Q9H6W3 641 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 SYDE2Q5VT97 1194 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
SUMO3-203ENST00000397898 ADGRF4Q8IZF3 695 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 KIFC2Q96AC6 838 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 PTPN18Q99952 460 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 SLF1Q9BQI6 1058 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 PRR12Q9ULL5 1215 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.63■□□□□ 0.41
SUMO3-203ENST00000397898 CNTNAP5Q8WYK1 1306 aa17.63■□□□□ 0.41
SUMO3-203ENST00000397898 BTBD19C9JJ37 291 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 JAK2O60674 1132 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
SUMO3-203ENST00000397898 NOGQ13253 232 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 PABPC4Q13310 644 aaKnown RBP eCLIP17.62■□□□□ 0.419e-9■■□□□ 13.4
SUMO3-203ENST00000397898 COG2Q14746 738 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 ANKRD23Q86SG2 305 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 PRPF38AQ8NAV1 312 aaKnown RBP17.62■□□□□ 0.41
SUMO3-203ENST00000397898 ZIC5Q96T25 663 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 JMJD4Q9H9V9 463 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 PPP1R9AQ9ULJ8 1098 aa17.62■□□□□ 0.41
SUMO3-203ENST00000397898 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 INHBEP58166 350 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 INTS4Q96HW7 963 aaKnown RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 RNF26Q9BY78 433 aaPredicted RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 PDHXO00330 501 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 FMNL1O95466 1100 aaPredicted RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 DSG3P32926 999 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 KIF23Q02241 960 aaPredicted RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 SREBF2Q12772 1141 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 SMARCC2Q8TAQ2 1214 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 PIGSQ96S52 555 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 ASCC2Q9H1I8 757 aaPredicted RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 HOXC10Q9NYD6 342 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 SLC45A1Q9Y2W3 748 aa17.61■□□□□ 0.41
SUMO3-203ENST00000397898 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
SUMO3-203ENST00000397898 hCG_1642624A0A1W2PR95 340 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 PRPF3O43395 683 aaKnown RBP17.6■□□□□ 0.41
SUMO3-203ENST00000397898 AOC2O75106 756 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 HSPA6P17066 643 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 OSBPP22059 807 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 HOMER1Q86YM7 354 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 MTMR8Q96EF0 704 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 RRP36Q96EU6 259 aaKnown RBP17.6■□□□□ 0.41
SUMO3-203ENST00000397898 MYPNQ86TC9 1320 aa17.6■□□□□ 0.41
SUMO3-203ENST00000397898 SPDYE16A6NNV3 312 aaPredicted RBP17.59■□□□□ 0.41
SUMO3-203ENST00000397898 IGF2BP3O00425 579 aaKnown RBP eCLIP17.59■□□□□ 0.411e-7■■■■□ 23.3
SUMO3-203ENST00000397898 FDPSP14324 419 aaKnown RBP17.59■□□□□ 0.41
SUMO3-203ENST00000397898 SNAP25P60880 206 aa17.59■□□□□ 0.41
SUMO3-203ENST00000397898 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
SUMO3-203ENST00000397898 AKAP17AQ02040 695 aaKnown RBP17.59■□□□□ 0.41
SUMO3-203ENST00000397898 ATG4CQ96DT6 458 aa17.59■□□□□ 0.41
SUMO3-203ENST00000397898 P2RX7Q99572 595 aaKnown RBP17.59■□□□□ 0.41
SUMO3-203ENST00000397898 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
SUMO3-203ENST00000397898 PNMA3Q9UL41 463 aa17.59■□□□□ 0.41
SUMO3-203ENST00000397898 SMC3Q9UQE7 1217 aa17.59■□□□□ 0.41
SUMO3-203ENST00000397898 WDR33Q9C0J8 1336 aaKnown RBP17.59■□□□□ 0.41
SUMO3-203ENST00000397898 VWA5AO00534 786 aa17.58■□□□□ 0.41
SUMO3-203ENST00000397898 ZBTB5O15062 677 aa17.58■□□□□ 0.41
SUMO3-203ENST00000397898 TM4SF4P48230 202 aa17.58■□□□□ 0.41
SUMO3-203ENST00000397898 VEGFBP49765 207 aa17.58■□□□□ 0.41
SUMO3-203ENST00000397898 CDC37Q16543 378 aaPredicted RBP17.58■□□□□ 0.41
SUMO3-203ENST00000397898 IFNL1Q8IU54 200 aa17.58■□□□□ 0.41
SUMO3-203ENST00000397898 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.41
SUMO3-203ENST00000397898 STK36Q9NRP7 1315 aa17.58■□□□□ 0.41
SUMO3-203ENST00000397898 RBM27Q9P2N5 1060 aaKnown RBP17.58■□□□□ 0.41
SUMO3-203ENST00000397898 SEC63Q9UGP8 760 aaKnown RBP17.58■□□□□ 0.41
SUMO3-203ENST00000397898 ADAMTS5Q9UNA0 930 aa17.58■□□□□ 0.41
SUMO3-203ENST00000397898 RLFQ13129 1914 aa17.58■□□□□ 0.4
SUMO3-203ENST00000397898 PARP14Q460N5 1801 aa17.58■□□□□ 0.4
SUMO3-203ENST00000397898 DEXIO95424 95 aa17.58■□□□□ 0.4
SUMO3-203ENST00000397898 CYP2C8P10632 490 aa17.58■□□□□ 0.4
SUMO3-203ENST00000397898 GJB2P29033 226 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms