RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LRIT3Q3SXY7 679 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 FAM47AQ5JRC9 791 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 NFXL1Q6ZNB6 911 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 USP6NLQ92738 828 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
SEC13-209ENST00000397117 ZKSCAN3Q9BRR0 538 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 RBPJLQ9UBG7 517 aa15.47■□□□□ 0.07
SEC13-209ENST00000397117 C19orf81C9J6K1 198 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 ASNSP08243 561 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 SYN1P17600 705 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 MAGEA10P43363 369 aaPredicted RBP15.46■□□□□ 0.07
SEC13-209ENST00000397117 HERVK_113P62684 666 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 IRX3P78415 501 aaPredicted RBP15.46■□□□□ 0.07
SEC13-209ENST00000397117 TFAP4Q01664 338 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 GABPAQ06546 454 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 WTAPQ15007 396 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 ME3Q16798 604 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 FOXP4Q8IVH2 680 aaPredicted RBP15.46■□□□□ 0.07
SEC13-209ENST00000397117 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 GPRC5AQ8NFJ5 357 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 IGDCC4Q8TDY8 1250 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 NUDT12Q9BQG2 462 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 DNAJC18Q9H819 358 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 GPHNQ9NQX3 736 aaPredicted RBP15.46■□□□□ 0.07
SEC13-209ENST00000397117 TMOD4Q9NZQ9 345 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 PFASO15067 1338 aa15.46■□□□□ 0.07
SEC13-209ENST00000397117 CCDC69A6NI79 296 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 COL6A1P12109 1028 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.06
SEC13-209ENST00000397117 RASA1P20936 1047 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 LIFRP42702 1097 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 STK3Q13188 491 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 CUL4AQ13619 759 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 Q3C1V9 767 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 CCDC178Q5BJE1 867 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 POTEEQ6S8J3 1075 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 DEFB123Q8N688 67 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 ZNF274Q96GC6 653 aaPredicted RBP15.46■□□□□ 0.06
SEC13-209ENST00000397117 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.06
SEC13-209ENST00000397117 LY9Q9HBG7 655 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 GINM1Q9NU53 330 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 A0A0C4DFX4 3053 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 TNKSO95271 1327 aa15.46■□□□□ 0.06
SEC13-209ENST00000397117 KLF18A0A0U1RQI7 1052 aa15.45■□□□□ 0.06
SEC13-209ENST00000397117 LARGE1O95461 756 aa15.45■□□□□ 0.06
SEC13-209ENST00000397117 CACNB2Q08289 660 aaPredicted RBP15.45■□□□□ 0.06
SEC13-209ENST00000397117 SHROOM1Q2M3G4 852 aaPredicted RBP15.45■□□□□ 0.06
SEC13-209ENST00000397117 SYNE3Q6ZMZ3 975 aa15.45■□□□□ 0.06
SEC13-209ENST00000397117 TRMT44Q8IYL2 757 aaKnown RBP15.45■□□□□ 0.06
SEC13-209ENST00000397117 SOCS4Q8WXH5 440 aa15.45■□□□□ 0.06
SEC13-209ENST00000397117 CHMP4CQ96CF2 233 aa15.45■□□□□ 0.06
SEC13-209ENST00000397117 INTS4Q96HW7 963 aaKnown RBP15.45■□□□□ 0.06
SEC13-209ENST00000397117 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
SEC13-209ENST00000397117 GOLGA8BA8MQT2 603 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 USP17L10C9JJH3 530 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 MAPK4P31152 587 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 EVCP57679 992 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 MORN1Q5T089 497 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 IFIT1BQ5T764 474 aaKnown RBP15.44■□□□□ 0.06
SEC13-209ENST00000397117 LHX8Q68G74 356 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 Q7L0L9 218 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 SGMS1Q86VZ5 419 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 CCDC83Q8IWF9 413 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 TDHQ8IZJ6 230 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 NECAB1Q8N987 351 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 SLC12A7Q9Y666 1083 aa15.44■□□□□ 0.06
SEC13-209ENST00000397117 PFKFB2O60825 505 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 PDIA3P30101 505 aaKnown RBP15.43■□□□□ 0.06
SEC13-209ENST00000397117 ERVK-9P63128 1117 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 ERVK-24P63145 666 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 ENAHQ8N8S7 591 aaPredicted RBP15.43■□□□□ 0.06
SEC13-209ENST00000397117 PORCNQ9H237 461 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 MTMR10Q9NXD2 777 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 CCND3P30281 292 aaPredicted RBP15.43■□□□□ 0.06
SEC13-209ENST00000397117 SHMT1P34896 483 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 CCL14Q16627 93 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 NEDD1Q8NHV4 660 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 GTF3C6Q969F1 213 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 UBE2OQ9C0C9 1292 aaKnown RBP15.43■□□□□ 0.06
SEC13-209ENST00000397117 CWC22Q9HCG8 908 aaKnown RBP15.43■□□□□ 0.06
SEC13-209ENST00000397117 TCP11L1Q9NUJ3 509 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 ZBTB21Q9ULJ3 1066 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 STXBP5LQ9Y2K9 1186 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 FRMPD3Q5JV73 1810 aa15.43■□□□□ 0.06
SEC13-209ENST00000397117 MPHOSPH10O00566 681 aaKnown RBP15.42■□□□□ 0.06
SEC13-209ENST00000397117 ZBTB43O43298 467 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
SEC13-209ENST00000397117 NMT2O60551 498 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 GDF11O95390 407 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 RGS2P41220 211 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 CCT2P78371 535 aaKnown RBP15.42■□□□□ 0.06
SEC13-209ENST00000397117 SEC23AQ15436 765 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 CERKLQ49MI3 558 aaPredicted RBP15.42■□□□□ 0.06
SEC13-209ENST00000397117 GPR142Q7Z601 462 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 PLEKHH3Q7Z736 793 aa15.42■□□□□ 0.06
SEC13-209ENST00000397117 GTF3C2Q8WUA4 911 aaPredicted RBP15.42■□□□□ 0.06
SEC13-209ENST00000397117 CCDC17Q96LX7 622 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms