RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NUP133Q8WUM0 1156 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 MKL1Q969V6 931 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 FERMT2Q96AC1 680 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 CEP95Q96GE4 821 aa19.43■□□□□ 0.7
DDR1-229ENST00000396342 ZHX1Q9UKY1 873 aaPredicted RBP19.43■□□□□ 0.7
DDR1-229ENST00000396342 PLXNB2O15031 1838 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 SMIM22K7EJ46 135 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 SOX1O00570 391 aaPredicted RBP19.42■□□□□ 0.7
DDR1-229ENST00000396342 SLC1A4P43007 532 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 STAT2P52630 851 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 PPARAQ07869 468 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 FAM47AQ5JRC9 791 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 NEDD1Q8NHV4 660 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 EVI5LQ96CN4 794 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 TOMM22Q9NS69 142 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 STX8Q9UNK0 236 aa19.42■□□□□ 0.7
DDR1-229ENST00000396342 ATP2A1O14983 1001 aa19.41■□□□□ 0.7
DDR1-229ENST00000396342 ZMYM1Q5SVZ6 1142 aa19.41■□□□□ 0.7
DDR1-229ENST00000396342 LRRC47Q8N1G4 583 aaKnown RBP19.41■□□□□ 0.7
DDR1-229ENST00000396342 VTI1AQ96AJ9 217 aa19.41■□□□□ 0.7
DDR1-229ENST00000396342 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.41■□□□□ 0.7
DDR1-229ENST00000396342 RAVER2Q9HCJ3 691 aaKnown RBP19.41■□□□□ 0.7
DDR1-229ENST00000396342 EPB41L4AQ9HCS5 686 aaPredicted RBP19.41■□□□□ 0.7
DDR1-229ENST00000396342 TACC3Q9Y6A5 838 aa19.41■□□□□ 0.7
DDR1-229ENST00000396342 SYNGAP1Q96PV0 1343 aa19.41■□□□□ 0.7
DDR1-229ENST00000396342 DCDC2CA8MYV0 355 aa19.4■□□□□ 0.7
DDR1-229ENST00000396342 TMEM232C9JQI7 657 aa19.4■□□□□ 0.7
DDR1-229ENST00000396342 RRP1P56182 461 aaKnown RBP19.4■□□□□ 0.7
DDR1-229ENST00000396342 AAMPQ13685 434 aa19.4■□□□□ 0.7
DDR1-229ENST00000396342 TRIM60Q495X7 471 aa19.4■□□□□ 0.7
DDR1-229ENST00000396342 TSEN34Q9BSV6 310 aaKnown RBP19.4■□□□□ 0.7
DDR1-229ENST00000396342 PHF24Q9UPV7 400 aa19.4■□□□□ 0.7
DDR1-229ENST00000396342 PCDHB15Q9Y5E8 787 aa19.4■□□□□ 0.7
DDR1-229ENST00000396342 RANBP6O60518 1105 aaKnown RBP19.39■□□□□ 0.69
DDR1-229ENST00000396342 PGK1P00558 417 aa19.39■□□□□ 0.69
DDR1-229ENST00000396342 IGHA2P01877 340 aa19.39■□□□□ 0.69
DDR1-229ENST00000396342 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
DDR1-229ENST00000396342 TKFCQ3LXA3 575 aa19.39■□□□□ 0.69
DDR1-229ENST00000396342 NOL8Q76FK4 1167 aaKnown RBP19.39■□□□□ 0.69
DDR1-229ENST00000396342 ZNF467Q7Z7K2 595 aaPredicted RBP19.39■□□□□ 0.69
DDR1-229ENST00000396342 PCSK9Q8NBP7 692 aaKnown RBP19.39■□□□□ 0.69
DDR1-229ENST00000396342 PI4K2BQ8TCG2 481 aa19.39■□□□□ 0.69
DDR1-229ENST00000396342 SLC38A10Q9HBR0 1119 aa19.39■□□□□ 0.69
DDR1-229ENST00000396342 HOMER2Q9NSB8 354 aa19.39■□□□□ 0.69
DDR1-229ENST00000396342 MOXD2PA6NHM9 499 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 POTEB2H3BUK9 544 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 RAG1P15918 1043 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 C1orf53Q5VUE5 145 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 CCDC174Q6PII3 467 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 TICAM2Q86XR7 235 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 REPS2Q8NFH8 660 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 GMCL1Q96IK5 515 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 GLT1D1Q96MS3 346 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 ABHD16BQ9H3Z7 469 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 ACAD9Q9H845 621 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 STARD7Q9NQZ5 370 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 HELLSQ9NRZ9 838 aa19.38■□□□□ 0.69
DDR1-229ENST00000396342 ZNF236Q9UL36 1845 aa19.37■□□□□ 0.69
DDR1-229ENST00000396342 MROH7Q68CQ1 1323 aa19.37■□□□□ 0.69
DDR1-229ENST00000396342 IGKV6D-41A0A0C4DH26 115 aa19.37■□□□□ 0.69
DDR1-229ENST00000396342 STAG1Q8WVM7 1258 aa19.37■□□□□ 0.69
DDR1-229ENST00000396342 SEC62Q99442 399 aaKnown RBP19.37■□□□□ 0.69
DDR1-229ENST00000396342 ASB14A6NK59 587 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 TRIM6-TRIM34B2RNG4 842 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 PQBP1O60828 265 aaKnown RBP19.36■□□□□ 0.69
DDR1-229ENST00000396342 CLTBP09497 229 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 C6orf222P0C671 652 aaPredicted RBP19.36■□□□□ 0.69
DDR1-229ENST00000396342 MCCP23508 829 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 TLE2Q04725 743 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 ACVR2BQ13705 512 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 CCDC96Q2M329 555 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 ZNF697Q5TEC3 545 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 MAMDC4Q6UXC1 1216 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 TMEM39AQ9NV64 488 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 PNMA2Q9UL42 364 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 STXBP5LQ9Y2K9 1186 aa19.36■□□□□ 0.69
DDR1-229ENST00000396342 PLIN4Q96Q06 1357 aa19.35■□□□□ 0.69
DDR1-229ENST00000396342 A0A1W2PQ45 241 aaPredicted RBP19.35■□□□□ 0.69
DDR1-229ENST00000396342 A0A1W2PQY0 241 aa19.35■□□□□ 0.69
DDR1-229ENST00000396342 DUSP11O75319 330 aaKnown RBP19.35■□□□□ 0.69
DDR1-229ENST00000396342 ZNF865P0CJ78 1059 aaPredicted RBP19.35■□□□□ 0.69
DDR1-229ENST00000396342 SNX17Q15036 470 aa19.35■□□□□ 0.69
DDR1-229ENST00000396342 RCSD1Q6JBY9 416 aa19.35■□□□□ 0.69
DDR1-229ENST00000396342 BADQ92934 168 aa19.35■□□□□ 0.69
DDR1-229ENST00000396342 MPHOSPH6Q99547 160 aaKnown RBP19.35■□□□□ 0.69
DDR1-229ENST00000396342 RWDD1Q9H446 243 aaPredicted RBP19.35■□□□□ 0.69
DDR1-229ENST00000396342 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.35■□□□□ 0.69
DDR1-229ENST00000396342 MTMR7Q9Y216 660 aa19.35■□□□□ 0.69
DDR1-229ENST00000396342 TLR3O15455 904 aaKnown RBP19.34■□□□□ 0.69
DDR1-229ENST00000396342 ZEB2O60315 1214 aa19.34■□□□□ 0.69
DDR1-229ENST00000396342 ALAS1P13196 640 aa19.34■□□□□ 0.69
DDR1-229ENST00000396342 TAL1P17542 331 aaPredicted RBP19.34■□□□□ 0.69
DDR1-229ENST00000396342 ACLYP53396 1101 aa19.34■□□□□ 0.69
DDR1-229ENST00000396342 RRP12Q5JTH9 1297 aaKnown RBP19.34■□□□□ 0.69
DDR1-229ENST00000396342 FAM109BQ6ICB4 259 aaPredicted RBP19.34■□□□□ 0.69
DDR1-229ENST00000396342 OTUD7AQ8TE49 926 aaPredicted RBP19.34■□□□□ 0.69
DDR1-229ENST00000396342 AP5M1Q9H0R1 490 aa19.34■□□□□ 0.69
DDR1-229ENST00000396342 PDLIM7Q9NR12 457 aa19.34■□□□□ 0.69
DDR1-229ENST00000396342 RNF146Q9NTX7 359 aa19.34■□□□□ 0.69
DDR1-229ENST00000396342 RIPK3Q9Y572 518 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms