RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 FEM1BQ9UK73 627 aa26.33■■□□□ 1.81
PARD6B-202ENST00000396039 SYNGAP1Q96PV0 1343 aa26.33■■□□□ 1.81
PARD6B-202ENST00000396039 IGKV6D-41A0A0C4DH26 115 aa26.32■■□□□ 1.8
PARD6B-202ENST00000396039 FDX1P10109 184 aa26.32■■□□□ 1.8
PARD6B-202ENST00000396039 TSHZ3Q63HK5 1081 aa26.32■■□□□ 1.8
PARD6B-202ENST00000396039 STK11IPQ8N1F8 1099 aa26.32■■□□□ 1.8
PARD6B-202ENST00000396039 DDX11Q96FC9 970 aa26.32■■□□□ 1.8
PARD6B-202ENST00000396039 PRDM5Q9NQX1 630 aaPredicted RBP26.32■■□□□ 1.8
PARD6B-202ENST00000396039 FBXO40Q9UH90 709 aa26.32■■□□□ 1.8
PARD6B-202ENST00000396039 COL6A3P12111 3177 aa26.32■■□□□ 1.8
PARD6B-202ENST00000396039 M0R2C6 588 aa26.31■■□□□ 1.8
PARD6B-202ENST00000396039 OAZ1P54368 228 aa26.31■■□□□ 1.8
PARD6B-202ENST00000396039 TRIM60Q495X7 471 aa26.31■■□□□ 1.8
PARD6B-202ENST00000396039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.31■■□□□ 1.8
PARD6B-202ENST00000396039 ZNF467Q7Z7K2 595 aaPredicted RBP26.31■■□□□ 1.8
PARD6B-202ENST00000396039 IFNL3Q8IZI9 196 aa26.31■■□□□ 1.8
PARD6B-202ENST00000396039 GMCL1P1Q8NEA9 526 aa26.31■■□□□ 1.8
PARD6B-202ENST00000396039 NUP88Q99567 741 aaPredicted RBP26.31■■□□□ 1.8
PARD6B-202ENST00000396039 MTMR10Q9NXD2 777 aa26.31■■□□□ 1.8
PARD6B-202ENST00000396039 MTMR4Q9NYA4 1195 aa26.31■■□□□ 1.8
PARD6B-202ENST00000396039 TSPY3P0CV98 308 aa26.3■■□□□ 1.8
PARD6B-202ENST00000396039 TSPY8P0CW00 308 aa26.3■■□□□ 1.8
PARD6B-202ENST00000396039 CEP95Q96GE4 821 aa26.3■■□□□ 1.8
PARD6B-202ENST00000396039 FSD1Q9BTV5 496 aa26.3■■□□□ 1.8
PARD6B-202ENST00000396039 NAPBQ9H115 298 aa26.3■■□□□ 1.8
PARD6B-202ENST00000396039 ZBTB47Q9UFB7 747 aaPredicted RBP26.3■■□□□ 1.8
PARD6B-202ENST00000396039 MAMDC4Q6UXC1 1216 aa26.29■■□□□ 1.8
PARD6B-202ENST00000396039 Q7L0L9 218 aa26.29■■□□□ 1.8
PARD6B-202ENST00000396039 FERMT2Q96AC1 680 aa26.29■■□□□ 1.8
PARD6B-202ENST00000396039 TSEN34Q9BSV6 310 aaKnown RBP26.29■■□□□ 1.8
PARD6B-202ENST00000396039 PDLIM7Q9NR12 457 aa26.29■■□□□ 1.8
PARD6B-202ENST00000396039 ZNF865P0CJ78 1059 aaPredicted RBP26.28■■□□□ 1.8
PARD6B-202ENST00000396039 CHST13Q8NET6 341 aa26.28■■□□□ 1.8
PARD6B-202ENST00000396039 NEDD1Q8NHV4 660 aa26.28■■□□□ 1.8
PARD6B-202ENST00000396039 KIFC2Q96AC6 838 aa26.28■■□□□ 1.8
PARD6B-202ENST00000396039 SLC38A10Q9HBR0 1119 aa26.28■■□□□ 1.8
PARD6B-202ENST00000396039 FAM184BQ9ULE4 1060 aa26.28■■□□□ 1.8
PARD6B-202ENST00000396039 TACC3Q9Y6A5 838 aa26.28■■□□□ 1.8
PARD6B-202ENST00000396039 MCM3APO60318 1980 aa26.27■■□□□ 1.8
PARD6B-202ENST00000396039 DNAJC25-GNG10A0A024R161 153 aa26.27■■□□□ 1.8
PARD6B-202ENST00000396039 PRDM1O75626 825 aa26.27■■□□□ 1.8
PARD6B-202ENST00000396039 CPXCR1Q8N123 301 aa26.27■■□□□ 1.8
PARD6B-202ENST00000396039 PI4K2BQ8TCG2 481 aa26.27■■□□□ 1.8
PARD6B-202ENST00000396039 NUP133Q8WUM0 1156 aa26.27■■□□□ 1.8
PARD6B-202ENST00000396039 MOXD2PA6NHM9 499 aa26.26■■□□□ 1.79
PARD6B-202ENST00000396039 PGK1P00558 417 aa26.26■■□□□ 1.79
PARD6B-202ENST00000396039 MX1P20591 662 aa26.26■■□□□ 1.79
PARD6B-202ENST00000396039 ANKRD35Q8N283 1001 aa26.26■■□□□ 1.79
PARD6B-202ENST00000396039 POTEB2H3BUK9 544 aa26.25■■□□□ 1.79
PARD6B-202ENST00000396039 CLTBP09497 229 aa26.25■■□□□ 1.79
PARD6B-202ENST00000396039 BMP3P12645 472 aa26.25■■□□□ 1.79
PARD6B-202ENST00000396039 STAT2P52630 851 aa26.25■■□□□ 1.79
PARD6B-202ENST00000396039 PPARAQ07869 468 aa26.25■■□□□ 1.79
PARD6B-202ENST00000396039 ZMYM1Q5SVZ6 1142 aa26.25■■□□□ 1.79
PARD6B-202ENST00000396039 LRRC47Q8N1G4 583 aaKnown RBP26.25■■□□□ 1.79
PARD6B-202ENST00000396039 SPC25Q9HBM1 224 aa26.25■■□□□ 1.79
PARD6B-202ENST00000396039 A0A1W2PQ45 241 aaPredicted RBP26.24■■□□□ 1.79
PARD6B-202ENST00000396039 A0A1W2PQY0 241 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 ADAMTS4O75173 837 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 TAL1P17542 331 aaPredicted RBP26.24■■□□□ 1.79
PARD6B-202ENST00000396039 TLE2Q04725 743 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 ZNF697Q5TEC3 545 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 SLFN13Q68D06 897 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 FAM160B2Q86V87 743 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 CHURC1Q8WUH1 139 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 BADQ92934 168 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 ABHD16BQ9H3Z7 469 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 RAVER2Q9HCJ3 691 aaKnown RBP26.24■■□□□ 1.79
PARD6B-202ENST00000396039 RIPK3Q9Y572 518 aa26.24■■□□□ 1.79
PARD6B-202ENST00000396039 SYNRGQ9UMZ2 1314 aa26.23■■□□□ 1.79
PARD6B-202ENST00000396039 DUSP11O75319 330 aaKnown RBP26.23■■□□□ 1.79
PARD6B-202ENST00000396039 SLC4A3P48751 1232 aa26.23■■□□□ 1.79
PARD6B-202ENST00000396039 TFAP4Q01664 338 aa26.23■■□□□ 1.79
PARD6B-202ENST00000396039 GMCL1Q96IK5 515 aa26.23■■□□□ 1.79
PARD6B-202ENST00000396039 ZHX1Q9UKY1 873 aaPredicted RBP26.23■■□□□ 1.79
PARD6B-202ENST00000396039 MROH7Q68CQ1 1323 aa26.22■■□□□ 1.79
PARD6B-202ENST00000396039 PCSK9Q8NBP7 692 aaKnown RBP26.22■■□□□ 1.79
PARD6B-202ENST00000396039 TOX2Q96NM4 488 aa26.22■■□□□ 1.79
PARD6B-202ENST00000396039 STARD7Q9NQZ5 370 aa26.22■■□□□ 1.79
PARD6B-202ENST00000396039 ISY1Q9ULR0 285 aaKnown RBP26.22■■□□□ 1.79
PARD6B-202ENST00000396039 PCDHB15Q9Y5E8 787 aa26.22■■□□□ 1.79
PARD6B-202ENST00000396039 DCDC2CA8MYV0 355 aa26.21■■□□□ 1.79
PARD6B-202ENST00000396039 DLL1O00548 723 aa26.21■■□□□ 1.79
PARD6B-202ENST00000396039 SNAI1O95863 264 aaPredicted RBP26.21■■□□□ 1.79
PARD6B-202ENST00000396039 CST5P28325 142 aaPredicted RBP26.21■■□□□ 1.79
PARD6B-202ENST00000396039 SLC1A4P43007 532 aa26.21■■□□□ 1.79
PARD6B-202ENST00000396039 ACLYP53396 1101 aa26.21■■□□□ 1.79
PARD6B-202ENST00000396039 SHHQ15465 462 aa26.21■■□□□ 1.79
PARD6B-202ENST00000396039 TKFCQ3LXA3 575 aa26.21■■□□□ 1.79
PARD6B-202ENST00000396039 SEC62Q99442 399 aaKnown RBP26.21■■□□□ 1.79
PARD6B-202ENST00000396039 ACAD9Q9H845 621 aa26.21■■□□□ 1.79
PARD6B-202ENST00000396039 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.21■■□□□ 1.79
PARD6B-202ENST00000396039 TRIM43BA6NCK2 446 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 TMEM232C9JQI7 657 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 KIAA0355O15063 1070 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 PLA2G6O60733 806 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 RAG1P15918 1043 aa26.2■■□□□ 1.78
PARD6B-202ENST00000396039 SMAD3P84022 425 aaKnown RBP26.2■■□□□ 1.78
PARD6B-202ENST00000396039 IKQ13123 557 aaPredicted RBP26.2■■□□□ 1.78
PARD6B-202ENST00000396039 ACVR2BQ13705 512 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms