RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 ECE1P42892 770 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 NDUFA8P51970 172 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 PRKG1Q13976 671 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 RGMBQ6NW40 437 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 KRI1Q8N9T8 703 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 TMEM47Q9BQJ4 181 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 TMEM39BQ9GZU3 492 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 MYH8P13535 1937 aa16.54■□□□□ 0.24
RTFDC1-203ENST00000395881 THSD7BQ9C0I4 1608 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 PALM3A6NDB9 673 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 AOC2O75106 756 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 TOP1P11387 765 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 STX1AQ16623 288 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 PPP4R3BQ5MIZ7 849 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 FKBP1CQ5VVH2 108 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 RESP18Q5W5W9 173 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 TNFRSF25Q93038 417 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 EHD4Q9H223 541 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 USP40Q9NVE5 1235 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 VPS54Q9P1Q0 977 aa16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 NOL7Q9UMY1 257 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-203ENST00000395881 FAM155AB1AL88 458 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 ZNF202O95125 648 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 PFKFB1P16118 471 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 PTPREP23469 700 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 TNNI2P48788 182 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 TTLL12Q14166 644 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 SHISA4Q96DD7 197 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 SPZ1Q9BXG8 430 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 OSBPL5Q9H0X9 879 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 MAD2L2Q9UI95 211 aa16.52■□□□□ 0.24
RTFDC1-203ENST00000395881 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 NFIAQ12857 509 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 NR5A1Q13285 461 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 NPY5RQ15761 445 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 ANO6Q4KMQ2 910 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 FAM83AQ86UY5 434 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 SDF4Q9BRK5 362 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 DHX36Q9H2U1 1008 aaKnown RBP16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 ANO10Q9NW15 660 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 TMOD2Q9NZR1 351 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 CCDC39Q9UFE4 941 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 SERPINB13Q9UIV8 391 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 STX8Q9UNK0 236 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 TRIM75PA6NK02 468 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 ESPNB1AK53 854 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 MARCKSP29966 332 aaPredicted RBP16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 LDLRAD1Q5T700 205 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 OXER1Q8TDS5 423 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 IDI2Q9BXS1 227 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
RTFDC1-203ENST00000395881 GREB1LQ9C091 1923 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 IGKV6D-41A0A0C4DH26 115 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 USP2O75604 605 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 SYKP43405 635 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 ZNF165P49910 485 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 DAGLBQ8NCG7 672 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 CCDC102AQ96A19 550 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 CBX8Q9HC52 389 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 CABP5Q9NP86 173 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 KIAA1468Q9P260 1216 aa16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 FBXO2Q9UK22 296 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 SRPRBQ9Y5M8 271 aaKnown RBP16.5■□□□□ 0.23
RTFDC1-203ENST00000395881 COL2A1P02458 1487 aaPredicted RBP16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 SLC10A3P09131 477 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 MAP2K2P36507 400 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 ZSCAN30Q86W11 494 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 RASAL3Q86YV0 1011 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 FAM151AQ8WW52 585 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 FERMT2Q96AC1 680 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 CCDC17Q96LX7 622 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 FAM13BQ9NYF5 915 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 USP25Q9UHP3 1055 aa16.49■□□□□ 0.23
RTFDC1-203ENST00000395881 OTOFQ9HC10 1997 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 ADCY5O95622 1261 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 NLRP5P59047 1200 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 TCP10Q12799 353 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 CEP95Q96GE4 821 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 BPIFA3Q9BQP9 254 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 WBP1LQ9NX94 342 aa16.48■□□□□ 0.23
RTFDC1-203ENST00000395881 MTMR4Q9NYA4 1195 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms