RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 DESI2Q9BSY9 194 aa19.12■□□□□ 0.65
UBFD1-201ENST00000395878 RTEL1Q9NZ71 1219 aa19.12■□□□□ 0.65
UBFD1-201ENST00000395878 EFCAB8A8MWE9 144 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 CYP2J2P51589 502 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 GNPTABQ3T906 1256 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 RDH13Q8NBN7 331 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 DEPTORQ8TB45 409 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 METTL14Q9HCE5 456 aaKnown RBP19.11■□□□□ 0.65
UBFD1-201ENST00000395878 RPN1P04843 607 aaKnown RBP19.11■□□□□ 0.65
UBFD1-201ENST00000395878 TCP1P17987 556 aaKnown RBP19.11■□□□□ 0.65
UBFD1-201ENST00000395878 PCK1P35558 622 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 NDUFA8P51970 172 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.11■□□□□ 0.65
UBFD1-201ENST00000395878 PANK4Q9NVE7 773 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 LRMPQ12912 555 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 PRR16Q569H4 304 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 SLAIN2Q9P270 581 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 SCRN1Q12765 414 aa19.11■□□□□ 0.65
UBFD1-201ENST00000395878 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
UBFD1-201ENST00000395878 MRPL11Q9Y3B7 192 aaKnown RBP19.11■□□□□ 0.65
UBFD1-201ENST00000395878 GIPC1O14908 333 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 VCX3BQ9H321 246 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 PKP1Q13835 747 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 ZNF827Q17R98 1081 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 VPS37BQ9H9H4 285 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 KCNK3O14649 394 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 RGS16O15492 202 aaPredicted RBP19.1■□□□□ 0.65
UBFD1-201ENST00000395878 SH3BP5O60239 455 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 ZMYM1Q5SVZ6 1142 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 PROCA1Q8NCQ7 364 aaPredicted RBP19.1■□□□□ 0.65
UBFD1-201ENST00000395878 MAP3K15Q6ZN16 1313 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 H0YCG3 227 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 TBC1D8O95759 1140 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 CTNNA1P35221 906 aaKnown RBP19.1■□□□□ 0.65
UBFD1-201ENST00000395878 SRGAP1Q7Z6B7 1085 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 FNBP4Q8N3X1 1017 aaPredicted RBP19.1■□□□□ 0.65
UBFD1-201ENST00000395878 TRPC6Q9Y210 931 aa19.1■□□□□ 0.65
UBFD1-201ENST00000395878 MLH3Q9UHC1 1453 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 GRK7Q8WTQ7 553 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 ARHGEF2Q92974 986 aaKnown RBP19.09■□□□□ 0.65
UBFD1-201ENST00000395878 COL4A3BPQ9Y5P4 624 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
UBFD1-201ENST00000395878 POLR2MP0CAP2 368 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 CHRNDQ07001 517 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 TNFAIP1Q13829 316 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 CLIC6Q96NY7 704 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 RABEP2Q9H5N1 569 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 DDX25Q9UHL0 483 aaKnown RBP19.09■□□□□ 0.65
UBFD1-201ENST00000395878 CLIC4Q9Y696 253 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 SPATA31E1Q6ZUB1 1445 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 KRIT1O00522 736 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 RNF40O75150 1001 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 PDE8BO95263 885 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 TSNAXIP1Q2TAA8 658 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 NSMCE1Q8WV22 266 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 SYMPKQ92797 1274 aaKnown RBP19.09■□□□□ 0.65
UBFD1-201ENST00000395878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.652e-6■□□□□ 10.8
UBFD1-201ENST00000395878 GCC2Q8IWJ2 1684 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 ADGBQ8N7X0 1667 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 PPIP5K2O43314 1243 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 ABCB4P21439 1286 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 AS3MTQ9HBK9 375 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
UBFD1-201ENST00000395878 FRMPD2Q68DX3 1309 aaPredicted RBP19.08■□□□□ 0.65
UBFD1-201ENST00000395878 BUB1BO60566 1050 aaPredicted RBP19.08■□□□□ 0.65
UBFD1-201ENST00000395878 PPP6R2O75170 966 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 PTGDRQ13258 359 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 FAM102BQ5T8I3 360 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 CASC4Q6P4E1 433 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 HAUS2Q9NVX0 235 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 GOLGA8KD6RF30 607 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 IRX3P78415 501 aaPredicted RBP19.08■□□□□ 0.65
UBFD1-201ENST00000395878 SLC39A14Q15043 492 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 FAM26FQ5R3K3 315 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 GPKOWQ92917 476 aaPredicted RBP eCLIP19.08■□□□□ 0.656e-6■□□□□ 11.1
UBFD1-201ENST00000395878 PFDN4Q9NQP4 134 aa19.08■□□□□ 0.65
UBFD1-201ENST00000395878 TRAPPC10P48553 1259 aa19.08■□□□□ 0.64
UBFD1-201ENST00000395878 FBXO11Q86XK2 927 aa19.08■□□□□ 0.64
UBFD1-201ENST00000395878 CDC25BP30305 580 aa19.08■□□□□ 0.64
UBFD1-201ENST00000395878 PNMA8AQ86V59 439 aaPredicted RBP19.08■□□□□ 0.64
UBFD1-201ENST00000395878 DDX17Q92841 729 aaKnown RBP19.08■□□□□ 0.64
UBFD1-201ENST00000395878 FOXP1Q9H334 677 aaPredicted RBP19.08■□□□□ 0.64
UBFD1-201ENST00000395878 CUEDC2Q9H467 287 aa19.08■□□□□ 0.64
UBFD1-201ENST00000395878 RAB20Q9NX57 234 aa19.08■□□□□ 0.64
UBFD1-201ENST00000395878 DBNLQ9UJU6 430 aaKnown RBP19.08■□□□□ 0.64
UBFD1-201ENST00000395878 LAD1O00515 517 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 ANKRD20A3Q5VUR7 823 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 TDRD7Q8NHU6 1098 aaKnown RBP19.07■□□□□ 0.64
UBFD1-201ENST00000395878 GLG1Q92896 1179 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 GSDMAQ96QA5 445 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 TRIM37O94972 964 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 BTDP43251 543 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 FAM178BQ8IXR5 827 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 ATP2A3Q93084 1043 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 GUCY2FP51841 1108 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 RIC8AQ9NPQ8 531 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 LARSQ9P2J5 1176 aaKnown RBP19.07■□□□□ 0.64
UBFD1-201ENST00000395878 SEMA3EO15041 775 aa19.07■□□□□ 0.64
UBFD1-201ENST00000395878 H2AFZP0C0S5 128 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms