RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 C5orf42Q9H799 3197 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 LPXNO60711 386 aa16.75■□□□□ 0.27
VCPKMT-201ENST00000395859 ARHGEF15O94989 841 aa16.75■□□□□ 0.27
VCPKMT-201ENST00000395859 PLCD1P51178 756 aa16.75■□□□□ 0.27
VCPKMT-201ENST00000395859 PCSK9Q8NBP7 692 aaKnown RBP16.75■□□□□ 0.27
VCPKMT-201ENST00000395859 CNPY2Q9Y2B0 182 aa16.75■□□□□ 0.27
VCPKMT-201ENST00000395859 CA3P07451 260 aa16.74■□□□□ 0.27
VCPKMT-201ENST00000395859 REPS2Q8NFH8 660 aa16.74■□□□□ 0.27
VCPKMT-201ENST00000395859 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
VCPKMT-201ENST00000395859 HIPK3Q9H422 1215 aa16.74■□□□□ 0.27
VCPKMT-201ENST00000395859 SNRKQ9NRH2 765 aa16.74■□□□□ 0.27
VCPKMT-201ENST00000395859 ZNF214Q9UL59 606 aaPredicted RBP16.74■□□□□ 0.27
VCPKMT-201ENST00000395859 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 ZDBF2Q9HCK1 2354 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 DNAJC25-GNG10A0A024R161 153 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 APBB1O00213 710 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 TLR3O15455 904 aaKnown RBP16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 FLOT1O75955 427 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 KCTD2Q14681 263 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 GORABQ5T7V8 394 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 TTC6Q86TZ1 520 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 FAM178BQ8IXR5 827 aa16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 PIH1D3Q9NQM4 214 aaKnown RBP16.73■□□□□ 0.27
VCPKMT-201ENST00000395859 C6orf222P0C671 652 aaPredicted RBP16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 TAP1Q03518 808 aa16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 EVX2Q03828 476 aa16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 ZNF512BQ96KM6 892 aaPredicted RBP16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 MEIS3Q99687 375 aa16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 CERS4Q9HA82 394 aa16.72■□□□□ 0.27
VCPKMT-201ENST00000395859 MYO15AQ9UKN7 3530 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 SPTBN4Q9H254 2564 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 CCL23P55773 120 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 GRB10Q13322 594 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 TTLL4Q14679 1199 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 ZNF467Q7Z7K2 595 aaPredicted RBP16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 CERS3Q8IU89 383 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 GJD3Q8N144 294 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 FGD4Q96M96 766 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 TMX2Q9Y320 296 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 MCM3APO60318 1980 aa16.71■□□□□ 0.27
VCPKMT-201ENST00000395859 COL4A4P53420 1690 aaPredicted RBP16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 POTEB3A0JP26 581 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 WDR46O15213 610 aaKnown RBP16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 ACVR2BQ13705 512 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 GNASQ5JWF2 1037 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 POTEBQ6S5H4 581 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 MIGA1Q8NAN2 632 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 VCPKMTQ9H867 229 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 ASTN1O14525 1302 aa16.7■□□□□ 0.26
VCPKMT-201ENST00000395859 DCHS1Q96JQ0 3298 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 VWA5AO00534 786 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 CYP7A1P22680 504 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 STAT3P40763 770 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 USP5P45974 858 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 SPRED2Q7Z698 418 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 RPUSD2Q8IZ73 545 aaKnown RBP16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 SPICE1Q8N0Z3 855 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 ZHX1Q9UKY1 873 aaPredicted RBP16.69■□□□□ 0.26
VCPKMT-201ENST00000395859 DMDP11532 3685 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 B4GALT4O60513 344 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 ALADP13716 330 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 COPB2P35606 906 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 ZAP70P43403 619 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 CLEC10AQ8IUN9 316 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 MAGEB6Q8N7X4 407 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 ARNTL2Q8WYA1 636 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 GPR108Q9NPR9 543 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 LMCD1Q9NZU5 365 aa16.68■□□□□ 0.26
VCPKMT-201ENST00000395859 PFKMP08237 780 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 LEXMQ3ZCV2 418 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 SCLYQ96I15 445 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 PHOX2BQ99453 314 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 SEZ6LQ9BYH1 1024 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 TRPV6Q9H1D0 765 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 SPC25Q9HBM1 224 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
VCPKMT-201ENST00000395859 ZBBXA8MT70 800 aa16.66■□□□□ 0.26
VCPKMT-201ENST00000395859 BEX3Q00994 111 aa16.66■□□□□ 0.26
VCPKMT-201ENST00000395859 ITGA7Q13683 1181 aa16.66■□□□□ 0.26
VCPKMT-201ENST00000395859 CXCL17Q6UXB2 119 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms