RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 PROSER3Q2NL68 480 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 ACCSLQ4AC99 568 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 CCDC38Q502W7 563 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 C9orf131Q5VYM1 1079 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 TRIM65Q6PJ69 517 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 SMIM5Q71RC9 77 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 FUKQ8N0W3 1084 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 GBP7Q8N8V2 638 aaPredicted RBP9.94□□□□□ -0.82
MSH5-205ENST00000395853 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.94□□□□□ -0.825e-8■■■□□ 15.7
MSH5-205ENST00000395853 ZWILCHQ9H900 591 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 PIM2Q9P1W9 311 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 ATP6V1DQ9Y5K8 247 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 BUB1BO60566 1050 aaPredicted RBP9.94□□□□□ -0.82
MSH5-205ENST00000395853 VDRP11473 427 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 KCNA3P22001 575 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 ABL2P42684 1182 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 AARSP49588 968 aaKnown RBP eCLIP9.94□□□□□ -0.823e-6■■■■■ 61.8
MSH5-205ENST00000395853 IGSF22Q8N9C0 903 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 SUGCTQ9HAC7 445 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 EBF2Q9HAK2 575 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 ABCB6Q9NP58 842 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 GALNT8Q9NY28 637 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 TUBGCP4Q9UGJ1 667 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 A6NHS1 94 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 UBTFL1P0CB47 393 aaPredicted RBP9.93□□□□□ -0.82
MSH5-205ENST00000395853 SDSP20132 328 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 ATP4AP20648 1035 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 RFC4P35249 363 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 PRELPP51888 382 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 MYO1EQ12965 1108 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 SLC39A6Q13433 755 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 DRP2Q13474 957 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 SOGA3Q5TF21 947 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 RASSF8Q8NHQ8 419 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 FAM76AQ8TAV0 307 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 UBE2OQ9C0C9 1292 aaKnown RBP9.93□□□□□ -0.82
MSH5-205ENST00000395853 BZW2Q9Y6E2 419 aaKnown RBP9.93□□□□□ -0.82
MSH5-205ENST00000395853 EIF3FO00303 357 aaPredicted RBP9.93□□□□□ -0.82
MSH5-205ENST00000395853 BIN1O00499 593 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 NDUFAB1O14561 156 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 TPPPO94811 219 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 SSBP05455 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
MSH5-205ENST00000395853 PPFIA1Q13136 1202 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 BLMHQ13867 455 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 BEND3Q5T5X7 828 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 TSHZ3Q63HK5 1081 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 NUGGCQ68CJ6 796 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 SMC1BQ8NDV3 1235 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 ERMNQ8TAM6 284 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 UHMK1Q8TAS1 419 aaKnown RBP9.93□□□□□ -0.82
MSH5-205ENST00000395853 OSBPL5Q9H0X9 879 aaPredicted RBP9.93□□□□□ -0.82
MSH5-205ENST00000395853 IRF2BPLQ9H1B7 796 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 VIPAS39Q9H9C1 493 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 PAIP2BQ9ULR5 123 aaKnown RBP9.93□□□□□ -0.82
MSH5-205ENST00000395853 HEG1Q9ULI3 1381 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 TCHHQ07283 1943 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 ADAMTS7Q9UKP4 1686 aa9.93□□□□□ -0.82
MSH5-205ENST00000395853 SCN11AQ9UI33 1791 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 SYF2O95926 243 aaKnown RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 MMEP08473 750 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 CTCFP49711 727 aaPredicted RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 BTG3Q14201 252 aaPredicted RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 DALRD3Q5D0E6 543 aaKnown RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 WDR78Q5VTH9 848 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 TBC1D31Q96DN5 1066 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 MPHOSPH6Q99547 160 aaKnown RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 DUSP9Q99956 384 aaKnown RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 CAPS2Q9BXY5 557 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 ZNHIT6Q9NWK9 470 aaKnown RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 IMPACTQ9P2X3 320 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 C15orf41Q9Y2V0 281 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 FANCGO15287 622 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 MGRN1O60291 552 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 ALOX15P16050 662 aaPredicted RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 NEK4P51957 841 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 PDE1AP54750 535 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 HDAC4P56524 1084 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 RNF187Q5TA31 235 aaPredicted RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 DZIP1Q86YF9 867 aaKnown RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 TNMDQ9H2S6 317 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
MSH5-205ENST00000395853 KDM6AO15550 1401 aaPredicted RBP9.92□□□□□ -0.82
MSH5-205ENST00000395853 ZFXP17010 805 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 CAMK4Q16566 473 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 LONRF3Q496Y0 759 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 COL13A1Q5TAT6 717 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 ANKZF1Q9H8Y5 726 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 ACTR5Q9H9F9 607 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 ZFATQ9P243 1243 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 DBF4Q9UBU7 674 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 PUF60Q9UHX1 559 aaKnown RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 GMEB1Q9Y692 573 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 LUC7L3O95232 432 aaKnown RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 TUBBP07437 444 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 SFPQP23246 707 aaKnown RBP eCLIP9.91□□□□□ -0.82
MSH5-205ENST00000395853 TUBB4BP68371 445 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 CLPPQ16740 277 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 PPP1R42Q7Z4L9 355 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 LCA5Q86VQ0 697 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms