RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SLC52A2Q9HAB3 445 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 GFOD1Q9NXC2 390 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 NOP53Q9NZM5 478 aaKnown RBP7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 SFMBT1Q9UHJ3 866 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 USP21Q9UK80 565 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 CNTNAP5Q8WYK1 1306 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 LEFTY1O75610 366 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 PPP2R5DQ14738 602 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 DENND5AQ6IQ26 1287 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 POMZP3Q6PJE2 187 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 BRAPQ7Z569 592 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 FGD2Q7Z6J4 655 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 MEGF10Q96KG7 1140 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 MYRFLQ96LU7 910 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 IPO9Q96P70 1041 aaKnown RBP7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 INTS7Q9NVH2 962 aaKnown RBP7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 MAGEC2Q9UBF1 373 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 FBXL21Q9UKT6 434 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 MINPP1Q9UNW1 487 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 MAPRE3Q9UPY8 281 aa7.01□□□□□ -1.29
HMGB1P10-201ENST00000395823 PIK3R2O00459 728 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 MAP4P27816 1152 aaKnown RBP7□□□□□ -1.29
HMGB1P10-201ENST00000395823 SOX5P35711 763 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 MBTPS1Q14703 1052 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 SLC35F1Q5T1Q4 408 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 CNNM4Q6P4Q7 775 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 FAM214BQ7L5A3 538 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 STRA8Q7Z7C7 330 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 DZIP1LQ8IYY4 767 aaKnown RBP7□□□□□ -1.29
HMGB1P10-201ENST00000395823 TMEM145Q8NBT3 493 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 SCLYQ96I15 445 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 Q96M66 194 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 ZDHHC15Q96MV8 337 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 DUSP23Q9BVJ7 150 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 NKX2-4Q9H2Z4 354 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 PRR13Q9NZ81 148 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 NDOR1Q9UHB4 597 aa7□□□□□ -1.29
HMGB1P10-201ENST00000395823 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 SCG5P05408 212 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 BMP3P12645 472 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 MAP4K2Q12851 820 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 GRB10Q13322 594 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 MAP7Q14244 749 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 ZNF460Q14592 562 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 PRSS53Q2L4Q9 553 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 NOL9Q5SY16 702 aaKnown RBP6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 FAM20CQ8IXL6 584 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 CRACR2BQ8N4Y2 399 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 DTWD2Q8NBA8 298 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 DDX1Q92499 740 aaKnown RBP6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 MCMBPQ9BTE3 642 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 HOMER2Q9NSB8 354 aa6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 DIS3Q9Y2L1 958 aaKnown RBP6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 GPR55Q9Y2T6 319 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 TNPO3Q9Y5L0 923 aaKnown RBP6.99□□□□□ -1.29
HMGB1P10-201ENST00000395823 H0Y8X5 98 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 SIGLEC6O43699 453 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 EYA4O95677 639 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 S100BP04271 92 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 CTSKP43235 329 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 GABREP78334 506 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 NFKB2Q00653 900 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 ADGRE1Q14246 886 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 BRDTQ58F21 947 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 FERMT3Q86UX7 667 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 GATA6Q92908 595 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 UTP4Q969X6 686 aaKnown RBP6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 YIPF2Q9BWQ6 316 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 G3BP2Q9UN86 482 aaKnown RBP6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 THRAP3Q9Y2W1 955 aaKnown RBP6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 ASXL2Q76L83 1435 aa6.98□□□□□ -1.29
HMGB1P10-201ENST00000395823 FAM95CA0A1B0GW59 222 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 SHISA3A0PJX4 238 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 C9orf172C9J069 976 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 VAMP4O75379 141 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 RASGRP1O95267 797 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 PRAMEF1O95521 474 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 SNRPB2P08579 225 aaKnown RBP6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 POU3F2P20265 443 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 HOXC12P31275 282 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 NRG1Q02297 640 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 PCBP1Q15365 356 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 PKN3Q6P5Z2 889 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 KREMEN2Q8NCW0 462 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 MTFR1LQ9H019 292 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 CYP26B1Q9NR63 512 aa6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 TPX2Q9ULW0 747 aaKnown RBP6.97□□□□□ -1.29
HMGB1P10-201ENST00000395823 PRR33A8MZF0 331 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 RXRBP28702 533 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 ECI1P42126 302 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 KCNJ6P48051 423 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 SEPT7Q16181 437 aaKnown RBP6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 DPY19L1Q2PZI1 675 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 CT47A1Q5JQC4 288 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 LHFPL2Q6ZUX7 228 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 PODNQ7Z5L7 613 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 PTPRN2Q92932 1015 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms