RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 XDHP47989 1333 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 H0YCG3 227 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 ITKQ08881 620 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 GREM2Q9H772 168 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 PNMA2Q9UL42 364 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 OSBPP22059 807 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 KIF11P52732 1056 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 KRT26Q7Z3Y9 468 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 CACYBPQ9HB71 228 aaKnown RBP11.45□□□□□ -0.58
COL4A6-203ENST00000394872 RXRBP28702 533 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 ATP11AP98196 1134 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 IL17REQ8NFR9 667 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 GOLGA5Q8TBA6 731 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 ZNF274Q96GC6 653 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-203ENST00000394872 RAB20Q9NX57 234 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 PZPP20742 1482 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 PBRM1Q86U86 1689 aa11.45□□□□□ -0.58
COL4A6-203ENST00000394872 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-203ENST00000394872 OR52Z1P0C646 297 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 STAT1P42224 750 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 LONRF2Q1L5Z9 754 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 FANCBQ8NB91 859 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 ANKFY1Q9P2R3 1169 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 LRRIQ4A6NIV6 560 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 I3L4J1 428 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 DDAH1O94760 285 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 NEDD9Q14511 834 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 ME3Q16798 604 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 SDCCAG8Q86SQ7 713 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-203ENST00000394872 C1orf112Q9NSG2 853 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 KIF24Q5T7B8 1368 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 A0A0D9SFI3 127 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 SCG2P13521 617 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 NOSTRINQ8IVI9 506 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 VPS37BQ9H9H4 285 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
COL4A6-203ENST00000394872 LTKP29376 864 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 KCTD2Q14681 263 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-203ENST00000394872 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 IFIH1Q9BYX4 1025 aaKnown RBP11.44□□□□□ -0.58
COL4A6-203ENST00000394872 AMFRQ9UKV5 643 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 NPC1L1Q9UHC9 1359 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-203ENST00000394872 DLATP10515 647 aaKnown RBP11.44□□□□□ -0.58
COL4A6-203ENST00000394872 ABCB4P21439 1286 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 ZNF131P52739 623 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 CARD6Q9BX69 1037 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 SEPT10Q9P0V9 454 aa11.44□□□□□ -0.58
COL4A6-203ENST00000394872 N4BP1O75113 896 aaKnown RBP11.43□□□□□ -0.58
COL4A6-203ENST00000394872 TMEM191BP0C7N4 346 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 KRT15P19012 456 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 ARHGEF6Q15052 776 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 RPS6KC1Q96S38 1066 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 APOL6Q9BWW8 343 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 HSPD1P10809 573 aaKnown RBP11.43□□□□□ -0.58
COL4A6-203ENST00000394872 ARMCX5Q6P1M9 558 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 CCDC94Q9BW85 323 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-203ENST00000394872 KCNJ18B7U540 433 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 PDE6CP51160 858 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 MORC3Q14149 939 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 KCNJ12Q14500 433 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 HADHQ16836 314 aaKnown RBP11.43□□□□□ -0.58
COL4A6-203ENST00000394872 TTC31Q49AM3 519 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-203ENST00000394872 GALNT17Q6IS24 598 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 CROCCP2Q86T23 111 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 CCNA1P78396 465 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 IQCDQ96DY2 449 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 CSRNP1Q96S65 589 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 HESX1Q9UBX0 185 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 SEPT9Q9UHD8 586 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-203ENST00000394872 CFAP74Q9C0B2 1584 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 PIK3CAP42336 1068 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 FAM196AQ6ZSG2 479 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 LEMD3Q9Y2U8 911 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 B4GALNT4Q76KP1 1039 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 SPICE1Q8N0Z3 855 aa11.43□□□□□ -0.58
COL4A6-203ENST00000394872 PAK2Q13177 524 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 CCDC62Q6P9F0 684 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 RUFY4Q6ZNE9 571 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 ASAP1Q9ULH1 1129 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 TLR3O15455 904 aaKnown RBP11.42□□□□□ -0.58
COL4A6-203ENST00000394872 PFKFB1P16118 471 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 U2AF2P26368 475 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL4A6-203ENST00000394872 SARNPP82979 210 aaKnown RBP11.42□□□□□ -0.58
COL4A6-203ENST00000394872 PTH1RQ03431 593 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 GBP6Q6ZN66 633 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 AP5M1Q9H0R1 490 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 ARHGAP6O43182 974 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 SERPINB2P05120 415 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 SATB1Q01826 763 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 TFDP1Q14186 410 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 PSMD6Q15008 389 aa11.42□□□□□ -0.58
COL4A6-203ENST00000394872 PALM2Q8IXS6 379 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms