RNA–Protein interactions for RNA: ENST00000394839.6

PRKACB-208, Transcript of protein kinase cAMP-activated catalytic subunit beta, human

TSL 2 BASIC

Gene PRKACB, Length 4,200 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACB-208	ENST00000394839	RFC2	P35250	354 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	MRPS5	P82675	430 aa	Known RBP	5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	SKIV2L	Q15477	1246 aa	Known RBP	5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	PI16	Q6UXB8	463 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	TRMT2A	Q8IZ69	625 aa	Known RBP	5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	PRDM6	Q9NQX0	595 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	PAG1	Q9NWQ8	432 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	NDUFB9	Q9Y6M9	179 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	ZNF532	Q9HCE3	1301 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	MGAM	O43451	1857 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	MBD4	O95243	580 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	C6orf222	P0C671	652 aa	Predicted RBP	5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	SLC4A3	P48751	1232 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	CCDC178	Q5BJE1	867 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	RHPN1	Q8TCX5	695 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	FERMT2	Q96AC1	680 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	ATG4C	Q96DT6	458 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	FAM161B	Q96MY7	647 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	ACAD9	Q9H845	621 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	NYAP2	Q9P242	653 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	USP17L12	C9JPN9	530 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	USP17L21	D6R901	530 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	TIMP1	P01033	207 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	FGB	P02675	491 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	CST5	P28325	142 aa	Predicted RBP	5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	SHMT1	P34896	483 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	SHH	Q15465	462 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839		Q3C1V9	767 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	SNRNP48	Q6IEG0	339 aa	Known RBP	5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	NPLOC4	Q8TAT6	608 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	ACER1	Q8TDN7	264 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	FAM122A	Q96E09	287 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	BTBD7	Q9P203	1132 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	DBNL	Q9UJU6	430 aa	Known RBP	5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	COG6	Q9Y2V7	657 aa		5.09	□□□□□ -1.59
PRKACB-208	ENST00000394839	ZBBX	A8MT70	800 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	EFCAB14	O75071	495 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	KCNJ6	P48051	423 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	ACLY	P53396	1101 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	BFSP2	Q13515	415 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	RCSD1	Q6JBY9	416 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	MFSD5	Q6N075	450 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	MYLIP	Q8WY64	445 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	CDCA7L	Q96GN5	454 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	COL25A1	Q9BXS0	654 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	MAF1	Q9H063	256 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	COG5	Q9UP83	839 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	PNMA6E	A0A0J9YXQ4	647 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839		A0A1W2PQ45	241 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839		A0A1W2PQY0	241 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	NKRF	O15226	690 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	CNMD	O75829	334 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	IGFBP4	P22692	258 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	CDK8	P49336	464 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	IL23A	Q9NPF7	189 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	SLC4A7	Q9Y6M7	1214 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	DDX60L	Q5H9U9	1706 aa	Known RBP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	ARVCF	O00192	962 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	TSPY3	P0CV98	308 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	TSPY8	P0CW00	308 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	MFAP1	P55081	439 aa	Known RBP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	HNRNPU	Q00839	825 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	FAM47A	Q5JRC9	791 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	GNAS	Q5JWF2	1037 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	C16orf86	Q6ZW13	317 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	ANKRD33	Q7Z3H0	272 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	ZNF576	Q9H609	170 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839		Q9Y3F1	56 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	ATP5J	P18859	108 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	DNAJB2	P25686	324 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	CPT1A	P50416	773 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	ACVR2B	Q13705	512 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	HERVK_113	Q902F9	699 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	LRRCC1	Q9C099	1032 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	DNAJC18	Q9H819	358 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	VTA1	Q9NP79	307 aa		5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKACB-208	ENST00000394839	TTLL1	O95922	423 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	EEF2	P13639	858 aa	Known RBP	5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	ADD2	P35612	726 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	TNFAIP2	Q03169	654 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	SBK1	Q52WX2	424 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	GUCD1	Q96NT3	240 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	SLC9A7	Q96T83	725 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	NAPB	Q9H115	298 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	BCL11A	Q9H165	835 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	ARMT1	Q9H993	441 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	MINDY4B	A8MYZ0	360 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	VWA5A	O00534	786 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	BMP3	P12645	472 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	PTPN11	Q06124	597 aa	Predicted RBP	5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	GABPA	Q06546	454 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	CCDC96	Q2M329	555 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	FAM83B	Q5T0W9	1011 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	C12orf60	Q5U649	245 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	IQSEC1	Q6DN90	963 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	CEP85	Q6P2H3	762 aa		5.07	□□□□□ -1.6
PRKACB-208	ENST00000394839	SPICE1	Q8N0Z3	855 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms