RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 GPATCH3Q96I76 525 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 RPS6KC1Q96S38 1066 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 TRAIPQ9BWF2 469 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 TAF1DQ9H5J8 278 aaPredicted RBP9.42□□□□□ -0.9
DHFR2-202ENST00000394221 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.42□□□□□ -0.9
DHFR2-202ENST00000394221 GMEB1Q9Y692 573 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 ARHGAP5Q13017 1502 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 TRAPPC3O43617 180 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 CAPN15O75808 1086 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 PSMD7P51665 324 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 MKRN4PQ13434 485 aaPredicted RBP9.42□□□□□ -0.9
DHFR2-202ENST00000394221 PNOCQ13519 176 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 ZNF268Q14587 947 aaPredicted RBP9.42□□□□□ -0.9
DHFR2-202ENST00000394221 KIAA0753Q2KHM9 967 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 ANO7Q6IWH7 933 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 DZIP1Q86YF9 867 aaKnown RBP9.42□□□□□ -0.9
DHFR2-202ENST00000394221 SPICE1Q8N0Z3 855 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 SMC1BQ8NDV3 1235 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 HAUS4Q9H6D7 363 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 NLRP2Q9NX02 1062 aa9.42□□□□□ -0.9
DHFR2-202ENST00000394221 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.42□□□□□ -0.9
DHFR2-202ENST00000394221 MADDQ8WXG6 1647 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 PSMD14O00487 310 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 IDEP14735 1019 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 CASP14P31944 242 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 SLC7A5Q01650 507 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 PABPC4Q13310 644 aaKnown RBP eCLIP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 TOB2Q14106 344 aaPredicted RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 RNF220Q5VTB9 566 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 LONP2Q86WA8 852 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 ZNF653Q96CK0 615 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 MPHOSPH6Q99547 160 aaKnown RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 NUP88Q99567 741 aaPredicted RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 SAMD15Q9P1V8 674 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 CDK12Q9NYV4 1490 aaPredicted RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 PNMA6EA0A0J9YXQ4 647 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 F6X3S4 739 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 IPO5O00410 1097 aaKnown RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 SP100P23497 879 aaPredicted RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 C8orf74Q6P047 294 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 C16orf87Q6PH81 154 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 IFT20Q8IY31 132 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 CAVIN3Q969G5 261 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 AGAP3Q96P47 875 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 SENP2Q9HC62 589 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 TMEM98Q9Y2Y6 226 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 SBNO2Q9Y2G9 1366 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 PTPDC1A2A3K4 754 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 YEATS4O95619 227 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 GSTA2P09210 222 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 KRT32Q14532 448 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 TCERG1LQ5VWI1 586 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 TRMT44Q8IYL2 757 aaKnown RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 RNF10Q8N5U6 811 aaKnown RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 ZBTB8BQ8NAP8 495 aaPredicted RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 IFT81Q8WYA0 676 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 KLHL29Q96CT2 875 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 LLPHQ9BRT6 129 aaKnown RBP9.41□□□□□ -0.9
DHFR2-202ENST00000394221 STIM2Q9P246 746 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 ABCF2Q9UG63 623 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
DHFR2-202ENST00000394221 PHF20L1A8MW92 1017 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 SUPT3HO75486 399 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ALOX15P16050 662 aaPredicted RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ALDH5A1P51649 535 aaPredicted RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ADCY1Q08828 1119 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 SESTD1Q86VW0 696 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 CCDC65Q8IXS2 484 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ARHGAP18Q8N392 663 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 LINC00301Q8NCQ3 95 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 PRCCQ92733 491 aaPredicted RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ABTB1Q969K4 478 aaPredicted RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 SYT15Q9BQS2 421 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 LRRC1Q9BTT6 524 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ATP10BO94823 1461 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 SMAPO00193 183 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 HIP1O00291 1037 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 KRT86O43790 486 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 CMA1P23946 247 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 PAFAH1B1P43034 410 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 MRPS25P82663 173 aaKnown RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 SF3A3Q12874 501 aaKnown RBP eCLIP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 MMGT1Q8N4V1 131 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 OGFOD1Q8N543 542 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 PI4K2BQ8TCG2 481 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 CARD9Q9H257 536 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 DMGDHQ9UI17 866 aaKnown RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ZNF233A6NK53 670 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 POLR3DP05423 398 aaPredicted RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 TUBP50607 506 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 GUCY2FP51841 1108 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 ITGB3BPQ13352 177 aaPredicted RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 EMC10Q5UCC4 262 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 PAPD7Q5XG87 772 aaKnown RBP9.4□□□□□ -0.9
DHFR2-202ENST00000394221 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 NANOGNBQ7Z5D8 188 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 SLF2Q8IX21 1173 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 MLKLQ8NB16 471 aa9.4□□□□□ -0.9
DHFR2-202ENST00000394221 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms