RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TMEM67Q5HYA8 995 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 RASGRP2Q7LDG7 609 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 REPS2Q8NFH8 660 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 NEK1Q96PY6 1258 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 MTA3Q9BTC8 594 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 MROH8Q9H579 483 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 SLC38A10Q9HBR0 1119 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 GJD2Q9UKL4 321 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 IVNS1ABPQ9Y6Y0 642 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 FRMPD2Q68DX3 1309 aaPredicted RBP22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 PRC1O43663 620 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 ERCC3P19447 782 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 HSPA4P34932 840 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 ZNF543Q08ER8 600 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 IRF5Q13568 498 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 GPATCH4Q5T3I0 446 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 TTBK2Q6IQ55 1244 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 BTNL9Q6UXG8 535 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 NBPF11Q86T75 865 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 NCAPG2Q86XI2 1143 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 RIOX2Q8IUF8 465 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 RASEFQ8IZ41 740 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 IGDCC4Q8TDY8 1250 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 NUDT12Q9BQG2 462 aa22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 ZNF214Q9UL59 606 aaPredicted RBP22.24■■□□□ 1.15
PDLIM7-204ENST00000393546 A0A0G2JMZ2 1700 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 EIF5BO60841 1220 aaKnown RBP22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 COPB2P35606 906 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 SLC9C1Q4G0N8 1177 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 CPXCR1Q8N123 301 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 SOCS4Q8WXH5 440 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 KCNB2Q92953 911 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 TMEM87BQ96K49 555 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 TEX13BQ9BXU2 312 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 PRR12Q9ULL5 1215 aa22.23■■□□□ 1.15
PDLIM7-204ENST00000393546 COL11A1P12107 1806 aaPredicted RBP22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 SLC15A5A6NIM6 579 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 ATP2A1O14983 1001 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 STRNO43815 780 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 PTPREP23469 700 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 SLC16A2P36021 539 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 OAZ1P54368 228 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 SYDE2Q5VT97 1194 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 TMTC2Q8N394 836 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 USP26Q9BXU7 913 aa22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 RAVER2Q9HCJ3 691 aaKnown RBP22.22■■□□□ 1.15
PDLIM7-204ENST00000393546 ADCY3O60266 1144 aa22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 PARP1P09874 1014 aaKnown RBP22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 GRK4P32298 578 aa22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 SLC4A3P48751 1232 aa22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 ASPRV1Q53RT3 343 aa22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 MORN1Q5T089 497 aa22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 SNRNP48Q6IEG0 339 aaKnown RBP22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 SLAIN1Q8ND83 568 aa22.21■■□□□ 1.15
PDLIM7-204ENST00000393546 CCDC85CA6NKD9 419 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 HMGB1P09429 215 aaKnown RBP22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 GOLGA8HP0CJ92 632 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 CYP2B6P20813 491 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 RGS2P41220 211 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 ADCK5Q3MIX3 580 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 DHX32Q7L7V1 743 aaKnown RBP22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 CATIPQ7Z7H3 387 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 PXYLP1Q8TE99 480 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 BIN2Q9UBW5 565 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 SNX14Q9Y5W7 946 aa22.2■■□□□ 1.14
PDLIM7-204ENST00000393546 FCER1AP12319 257 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 MAP2K5Q13163 448 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 GRB14Q14449 540 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 NFXL1Q6ZNB6 911 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 ABRAQ8N0Z2 381 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 SH3TC2Q8TF17 1288 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 USP6NLQ92738 828 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 ARMC5Q96C12 935 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 LY9Q9HBG7 655 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 SENP2Q9HC62 589 aa22.19■■□□□ 1.14
PDLIM7-204ENST00000393546 WDR19Q8NEZ3 1342 aa22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 CCDC69A6NI79 296 aa22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 SH2B2O14492 632 aaPredicted RBP22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 XRCC5P13010 732 aaKnown RBP22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 LIFRP42702 1097 aa22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 SNAP25P60880 206 aa22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 COL9A3Q14050 684 aaPredicted RBP22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 CCDC174Q6PII3 467 aa22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 UBA5Q9GZZ9 404 aa22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 RANBP17Q9H2T7 1088 aaKnown RBP22.18■■□□□ 1.14
PDLIM7-204ENST00000393546 ELNP15502 786 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 PSMA5P28066 241 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 EXOSC10Q01780 885 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 DPP9Q86TI2 863 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 TRMT44Q8IYL2 757 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 AGBL1Q96MI9 1066 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 JAKMIP1Q96N16 626 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 MMP19Q99542 508 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 LRRC2Q9BYS8 371 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 GPHNQ9NQX3 736 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 SLC5A4Q9NY91 659 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 RIPK3Q9Y572 518 aa22.17■■□□□ 1.14
PDLIM7-204ENST00000393546 ZNF536O15090 1300 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 PLXNB2O15031 1838 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 ADORA2AP29274 412 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms