RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 WDR18Q9BV38 432 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 PDCP20941 246 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 NASPP49321 788 aaPredicted RBP12.5□□□□□ -0.41
PDGFD-202ENST00000393158 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 SPICE1Q8N0Z3 855 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 VCPKMTQ9H867 229 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 ELP1O95163 1332 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 PLA2G6O60733 806 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 CDKL5O76039 1030 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 TNNI2P48788 182 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 C4orf32Q8N8J7 132 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 KIAA1683Q9H0B3 1180 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 TRAF5O00463 557 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 MYSM1Q5VVJ2 828 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 MCTP1Q6DN14 999 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 CTCFLQ8NI51 663 aaPredicted RBP12.49□□□□□ -0.41
PDGFD-202ENST00000393158 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 PLXNA1Q9UIW2 1896 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 SLFN13Q68D06 897 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 FOXP1Q9H334 677 aaPredicted RBP12.49□□□□□ -0.41
PDGFD-202ENST00000393158 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
PDGFD-202ENST00000393158 CPLX1O14810 134 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 ITGBL1O95965 494 aaPredicted RBP12.48□□□□□ -0.41
PDGFD-202ENST00000393158 ASNSP08243 561 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 IL17AQ16552 155 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 AXDND1Q5T1B0 1012 aaPredicted RBP12.48□□□□□ -0.41
PDGFD-202ENST00000393158 LDLRAD1Q5T700 205 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
PDGFD-202ENST00000393158 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 FBXO28Q9NVF7 368 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 SNAP25P60880 206 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 WRNIP1Q96S55 665 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
PDGFD-202ENST00000393158 GPCPD1Q9NPB8 672 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 GRIN1Q05586 938 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 NOSTRINQ8IVI9 506 aa12.48□□□□□ -0.41
PDGFD-202ENST00000393158 DIS3L2Q8IYB7 885 aaKnown RBP12.48□□□□□ -0.41
PDGFD-202ENST00000393158 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
PDGFD-202ENST00000393158 KIF5BP33176 963 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 CST9Q5W186 159 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 LINC00301Q8NCQ3 95 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 NMRK2Q9NPI5 230 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 RTEL1Q9NZ71 1219 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 TFIP11Q9UBB9 837 aaKnown RBP12.47□□□□□ -0.41
PDGFD-202ENST00000393158 ZSWIM8A7E2V4 1837 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 MEIS2O14770 477 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 PRR12Q9ULL5 1215 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 MTMR7Q9Y216 660 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
PDGFD-202ENST00000393158 VCAM1P19320 739 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
PDGFD-202ENST00000393158 MTMR2Q13614 643 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 SH3D19Q5HYK7 790 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 GPATCH4Q5T3I0 446 aaKnown RBP12.47□□□□□ -0.41
PDGFD-202ENST00000393158 KRT26Q7Z3Y9 468 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 LZTS2Q9BRK4 669 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 GOLPH3LQ9H4A5 285 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 GINM1Q9NU53 330 aa12.47□□□□□ -0.41
PDGFD-202ENST00000393158 SNW1Q13573 536 aaKnown RBP12.46□□□□□ -0.41
PDGFD-202ENST00000393158 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 SYNE3Q6ZMZ3 975 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 FAM184AQ8NB25 1140 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 RASGRP4Q8TDF6 673 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 PIBF1Q8WXW3 757 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 COA7Q96BR5 231 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 R3HDMLQ9H3Y0 253 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 PCDHB6Q9Y5E3 794 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 ESYT2A0FGR8 921 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 ZBTB5O15062 677 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
PDGFD-202ENST00000393158 BACE1P56817 501 aa12.46□□□□□ -0.42
PDGFD-202ENST00000393158 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.42
PDGFD-202ENST00000393158 RRAGCQ9HB90 399 aa12.46□□□□□ -0.42
PDGFD-202ENST00000393158 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 GHRHRQ02643 423 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 TMEM63CQ9P1W3 806 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 MGAMO43451 1857 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
PDGFD-202ENST00000393158 BMP3P12645 472 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 MAP1SQ66K74 1059 aaPredicted RBP12.45□□□□□ -0.42
PDGFD-202ENST00000393158 ENGASEQ8NFI3 743 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
PDGFD-202ENST00000393158 SLC1A4P43007 532 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 BRAPQ7Z569 592 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
PDGFD-202ENST00000393158 PCDHA4Q9UN74 947 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 PASKQ96RG2 1323 aa12.45□□□□□ -0.42
PDGFD-202ENST00000393158 TREML2Q5T2D2 321 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 LRRC15Q8TF66 581 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms