RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
SUMO1-203ENST00000392246 ATG4CQ96DT6 458 aa17.4■□□□□ 0.38
SUMO1-203ENST00000392246 MYL10Q9BUA6 226 aa17.4■□□□□ 0.38
SUMO1-203ENST00000392246 CPA4Q9UI42 421 aa17.4■□□□□ 0.38
SUMO1-203ENST00000392246 MAD2L2Q9UI95 211 aa17.4■□□□□ 0.38
SUMO1-203ENST00000392246 TSKSQ9UJT2 592 aa17.4■□□□□ 0.38
SUMO1-203ENST00000392246 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
SUMO1-203ENST00000392246 GPR25O00155 361 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 ZBTB43O43298 467 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 FDX1P10109 184 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 BCRP11274 1271 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 RCAN1P53805 252 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 EVCP57679 992 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 ANKRD1Q15327 319 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 MICU3Q86XE3 530 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 RBPJLQ9UBG7 517 aa17.39■□□□□ 0.37
SUMO1-203ENST00000392246 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-203ENST00000392246 KLRF2D3W0D1 207 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 VWA5AO00534 786 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 FOXN1O15353 648 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 SLC16A2P36021 539 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 RABEP1Q15276 862 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 FAM110CQ1W6H9 321 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 POTEEQ6S8J3 1075 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 PAGR1Q9BTK6 254 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 PRR12Q9ULL5 1215 aa17.38■□□□□ 0.37
SUMO1-203ENST00000392246 NAP1L2Q9ULW6 460 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-203ENST00000392246 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-203ENST00000392246 ZBED4O75132 1171 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 RXRAP19793 462 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 GNAQP50148 359 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 SP3Q02447 781 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 RAB11FIP4Q86YS3 637 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 GPRC5AQ8NFJ5 357 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 TXNRD2Q9NNW7 524 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 CTCFP49711 727 aaPredicted RBP17.37■□□□□ 0.37
SUMO1-203ENST00000392246 AK2P54819 239 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 ERVK-24P63145 666 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 PPP2R5BQ15173 497 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 CCDC144CPQ8IYA2 1237 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 ZNF274Q96GC6 653 aaPredicted RBP17.37■□□□□ 0.37
SUMO1-203ENST00000392246 LZTS2Q9BRK4 669 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 SLC38A10Q9HBR0 1119 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
SUMO1-203ENST00000392246 BTBD7Q9P203 1132 aa17.37■□□□□ 0.37
SUMO1-203ENST00000392246 A0A0G2JMZ2 1700 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 GOLGA8AA7E2F4 631 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 FKTNO75072 461 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 CNMDO75829 334 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 HSPA8P11142 646 aaKnown RBP17.36■□□□□ 0.37
SUMO1-203ENST00000392246 METAP2P50579 478 aaKnown RBP eCLIP17.36■□□□□ 0.37
SUMO1-203ENST00000392246 TMEM132BQ14DG7 1078 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 RTN1Q16799 776 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 Q3C1V9 767 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 ADGRF4Q8IZF3 695 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 REPS2Q8NFH8 660 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
SUMO1-203ENST00000392246 CPVLQ9H3G5 476 aa17.36■□□□□ 0.37
SUMO1-203ENST00000392246 BAZ2BQ9UIF8 2168 aaKnown RBP17.35■□□□□ 0.37
SUMO1-203ENST00000392246 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
SUMO1-203ENST00000392246 DHX16O60231 1041 aaKnown RBP17.35■□□□□ 0.37
SUMO1-203ENST00000392246 PEX10O60683 326 aa17.35■□□□□ 0.37
SUMO1-203ENST00000392246 SMARCA1P28370 1054 aa17.35■□□□□ 0.37
SUMO1-203ENST00000392246 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
SUMO1-203ENST00000392246 OAZ1P54368 228 aa17.35■□□□□ 0.37
SUMO1-203ENST00000392246 CCNA1P78396 465 aa17.35■□□□□ 0.37
SUMO1-203ENST00000392246 PLS1Q14651 629 aa17.35■□□□□ 0.37
SUMO1-203ENST00000392246 ZNF296Q8WUU4 475 aaPredicted RBP17.35■□□□□ 0.37
SUMO1-203ENST00000392246 SPATC1LQ9H0A9 340 aa17.35■□□□□ 0.37
SUMO1-203ENST00000392246 RANBP17Q9H2T7 1088 aaKnown RBP17.35■□□□□ 0.37
SUMO1-203ENST00000392246 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
SUMO1-203ENST00000392246 STAT3P40763 770 aa17.34■□□□□ 0.37
SUMO1-203ENST00000392246 RIOX1Q9H6W3 641 aa17.34■□□□□ 0.37
SUMO1-203ENST00000392246 VAT1LQ9HCJ6 419 aa17.34■□□□□ 0.37
SUMO1-203ENST00000392246 ZNF214Q9UL59 606 aaPredicted RBP17.34■□□□□ 0.37
SUMO1-203ENST00000392246 HPS5Q9UPZ3 1129 aa17.34■□□□□ 0.37
SUMO1-203ENST00000392246 MYH6P13533 1939 aa17.34■□□□□ 0.37
SUMO1-203ENST00000392246 NID2Q14112 1375 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 ST18O60284 1047 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 LBX1P52954 281 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 LACTBP83111 547 aaPredicted RBP17.33■□□□□ 0.37
SUMO1-203ENST00000392246 KIF22Q14807 665 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 NBPF11Q86T75 865 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 CCAR1Q8IX12 1150 aaKnown RBP17.33■□□□□ 0.37
SUMO1-203ENST00000392246 CPXCR1Q8N123 301 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 SRBD1Q8N5C6 995 aaKnown RBP17.33■□□□□ 0.37
SUMO1-203ENST00000392246 ERO1AQ96HE7 468 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 SPZ1Q9BXG8 430 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 JMJD4Q9H9V9 463 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.37
SUMO1-203ENST00000392246 CASP8AP2Q9UKL3 1982 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms