RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 ZNF408Q9H9D4 720 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 FANCLQ9NW38 375 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 KIF20AO95235 890 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 UBXN2AP68543 259 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 TNFAIP1Q13829 316 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 CDC42EP5Q6NZY7 148 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 ZNF397Q8NF99 534 aaPredicted RBP14.41□□□□□ -0.1
ERCC2-204ENST00000391945 SEPT11Q9NVA2 429 aaKnown RBP14.41□□□□□ -0.1
ERCC2-204ENST00000391945 WDHD1O75717 1129 aaPredicted RBP14.41□□□□□ -0.1
ERCC2-204ENST00000391945 RASA1P20936 1047 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 SPAG1Q07617 926 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
ERCC2-204ENST00000391945 UBXN4Q92575 508 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
ERCC2-204ENST00000391945 PARP4Q9UKK3 1724 aaKnown RBP14.41□□□□□ -0.1
ERCC2-204ENST00000391945 ALS2Q96Q42 1657 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 GPR75-ASB3A0A0A6YYF3 556 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 ZSCAN12O43309 604 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 R3HDM1Q15032 1099 aaKnown RBP14.41□□□□□ -0.1
ERCC2-204ENST00000391945 SLC51AQ86UW1 340 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 SYCP3Q8IZU3 236 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 PCDHA12Q9UN75 941 aa14.41□□□□□ -0.1
ERCC2-204ENST00000391945 TRPM3Q9HCF6 1732 aaPredicted RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 SYNRGQ9UMZ2 1314 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 MYCLP12524 364 aaPredicted RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 MATR3P43243 847 aaKnown RBP eCLIP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 UBXN1Q04323 297 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 FOXP4Q8IVH2 680 aaPredicted RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 CHURC1Q8WUH1 139 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 ALAS1P13196 640 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 NFIAQ12857 509 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 CTAGE1Q96RT6 745 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 SRPRBQ9Y5M8 271 aaKnown RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 COL14A1Q05707 1796 aaKnown RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 PPP1R12BO60237 982 aaPredicted RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 EEF2P13639 858 aaKnown RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 EVX2Q03828 476 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 TROAPQ12815 778 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 TBC1D10BQ4KMP7 808 aaPredicted RBP14.4□□□□□ -0.1
ERCC2-204ENST00000391945 GALNT17Q6IS24 598 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 ZSWIM4Q9H7M6 989 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 DNAI1Q9UI46 699 aa14.4□□□□□ -0.1
ERCC2-204ENST00000391945 BMP3P12645 472 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 STRIP1Q5VSL9 837 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 TMED8Q6PL24 325 aaPredicted RBP14.39□□□□□ -0.11
ERCC2-204ENST00000391945 GPIHBP1Q8IV16 184 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 AMNQ9BXJ7 453 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 AGXT2Q9BYV1 514 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 OSBPL5Q9H0X9 879 aaPredicted RBP14.39□□□□□ -0.11
ERCC2-204ENST00000391945 BCL9LQ86UU0 1499 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 PTPREP23469 700 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 MAEAQ7L5Y9 396 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 FMR1NBQ8N0W7 255 aaPredicted RBP14.39□□□□□ -0.11
ERCC2-204ENST00000391945 PDLIM2Q96JY6 352 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 ABCC6O95255 1503 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
ERCC2-204ENST00000391945 DPEP1P16444 411 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 TRAPPC10P48553 1259 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 TTBK2Q6IQ55 1244 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 FAM114A1Q8IWE2 563 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 GLT8D2Q9H1C3 349 aa14.39□□□□□ -0.11
ERCC2-204ENST00000391945 DDX25Q9UHL0 483 aaKnown RBP14.39□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L10C9JJH3 530 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 PAK1Q13153 545 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 GRM4Q14833 912 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
ERCC2-204ENST00000391945 KCNQ5Q9NR82 932 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
ERCC2-204ENST00000391945 CSGALNACT2Q8N6G5 542 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 NBPF3Q9H094 633 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 TAB2Q9NYJ8 693 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 ANAPC4Q9UJX5 808 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 FLOT1O75955 427 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 RCAN1P53805 252 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 PPP4CP60510 307 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 GNG11P61952 73 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 SHC4Q6S5L8 630 aa14.38□□□□□ -0.11
ERCC2-204ENST00000391945 TRAF5O00463 557 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 NF2P35240 595 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 DNA2P51530 1060 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 CYP4A11Q02928 519 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 RTFDC1Q9BY42 306 aaPredicted RBP14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 PLSCR1O15162 318 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 HOXA13P31271 388 aaPredicted RBP14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 USP17L6PQ6QN14 398 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 NELFBQ8WX92 580 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 TMEM260Q9NX78 707 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 SLIT2O94813 1529 aa14.37□□□□□ -0.11
ERCC2-204ENST00000391945 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms