RNA–Protein interactions for RNA: ENST00000390617.2

IGHV3-35-201, Transcript of immunoglobulin heavy variable 3-35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGHV3-35, Length 366 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35-201ENST00000390617 SNRNP48Q6IEG0 339 aaKnown RBP18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 RNF180Q86T96 592 aa18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 ZNF444Q8N0Y2 327 aaPredicted RBP18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 STK11IPQ8N1F8 1099 aa18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 PDLIM7Q9NR12 457 aa18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 LAMA2P24043 3122 aaKnown RBP18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 PLIN4Q96Q06 1357 aa18.01■□□□□ 0.47
IGHV3-35-201ENST00000390617 SYNGAP1Q96PV0 1343 aa18■□□□□ 0.47
IGHV3-35-201ENST00000390617 PATL2C9JE40 543 aaKnown RBP18■□□□□ 0.47
IGHV3-35-201ENST00000390617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18■□□□□ 0.47
IGHV3-35-201ENST00000390617 IFNL3Q8IZI9 196 aa18■□□□□ 0.47
IGHV3-35-201ENST00000390617 FERMT2Q96AC1 680 aa18■□□□□ 0.47
IGHV3-35-201ENST00000390617 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
IGHV3-35-201ENST00000390617 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
IGHV3-35-201ENST00000390617 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 ERC2O15083 957 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 TTLL1O95922 423 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 APPP05067 770 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 TAL1P17542 331 aaPredicted RBP17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 ANKRD45Q5TZF3 282 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 MAMDC4Q6UXC1 1216 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 GMCL1P1Q8NEA9 526 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 CEP95Q96GE4 821 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 MTMR4Q9NYA4 1195 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
IGHV3-35-201ENST00000390617 ZBED4O75132 1171 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 ADAMTS4O75173 837 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 PRDM1O75626 825 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 PGK1P00558 417 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 OAZ1P54368 228 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 PI4K2BQ8TCG2 481 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 BADQ92934 168 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 NACAP1Q9BZK3 213 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 FEM1BQ9UK73 627 aa17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 SUPT16HQ9Y5B9 1047 aaKnown RBP17.98■□□□□ 0.47
IGHV3-35-201ENST00000390617 A0A1W2PQ45 241 aaPredicted RBP17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 A0A1W2PQY0 241 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 TRIM43BA6NCK2 446 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 DLL1O00548 723 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 TLE2Q04725 743 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 PDE4BQ07343 736 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 SH3RF1Q7Z6J0 888 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 NEDD1Q8NHV4 660 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 KIFC2Q96AC6 838 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 TRIM43Q96BQ3 446 aaPredicted RBP17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 TSEN34Q9BSV6 310 aaKnown RBP17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 FBXO40Q9UH90 709 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 CTDP1Q9Y5B0 961 aaPredicted RBP17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 TACC3Q9Y6A5 838 aa17.97■□□□□ 0.47
IGHV3-35-201ENST00000390617 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 SLC3A2P08195 630 aaKnown RBP17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 CLTBP09497 229 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 FDX1P10109 184 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 SHHQ15465 462 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 CHST13Q8NET6 341 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 SEC62Q99442 399 aaKnown RBP17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 FAM184BQ9ULE4 1060 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 CUL9Q8IWT3 2517 aa17.96■□□□□ 0.47
IGHV3-35-201ENST00000390617 SYNRGQ9UMZ2 1314 aa17.96■□□□□ 0.46
IGHV3-35-201ENST00000390617 A0A0C4DFX4 3053 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 AAMPQ13685 434 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 ZMYM1Q5SVZ6 1142 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 C9orf50Q5SZB4 431 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 ZNF697Q5TEC3 545 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 LRRC47Q8N1G4 583 aaKnown RBP17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 LENG1Q96BZ8 264 aaPredicted RBP17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 GUCD1Q96NT3 240 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 FSD1Q9BTV5 496 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 NAPBQ9H115 298 aa17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 RWDD1Q9H446 243 aaPredicted RBP17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 RAVER2Q9HCJ3 691 aaKnown RBP17.95■□□□□ 0.46
IGHV3-35-201ENST00000390617 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 KIAA0355O15063 1070 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 BMP3P12645 472 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 ACLYP53396 1101 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 PPARAQ07869 468 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 SLFN13Q68D06 897 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 ANKRD33Q7Z3H0 272 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 ANKRD35Q8N283 1001 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 ABHD16BQ9H3Z7 469 aa17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 ZHX1Q9UKY1 873 aaPredicted RBP17.94■□□□□ 0.46
IGHV3-35-201ENST00000390617 MX1P20591 662 aa17.93■□□□□ 0.46
IGHV3-35-201ENST00000390617 ITGB8P26012 769 aa17.93■□□□□ 0.46
IGHV3-35-201ENST00000390617 CST5P28325 142 aaPredicted RBP17.93■□□□□ 0.46
IGHV3-35-201ENST00000390617 SLC4A3P48751 1232 aa17.93■□□□□ 0.46
IGHV3-35-201ENST00000390617 STAT2P52630 851 aa17.93■□□□□ 0.46
IGHV3-35-201ENST00000390617 SMAD3P84022 425 aaKnown RBP17.93■□□□□ 0.46
IGHV3-35-201ENST00000390617 TFAP4Q01664 338 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms