RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 CTNNA3Q9UI47 895 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 STX8Q9UNK0 236 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
IGHV4-28-201ENST00000390612 RAD21O60216 631 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 FDX1P10109 184 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 MCCP23508 829 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 COPB2P35606 906 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 PTH1RQ03431 593 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 PLS1Q14651 629 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 WDR78Q5VTH9 848 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 OLFML2BQ68BL8 750 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 NCAPG2Q86XI2 1143 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 RUFY2Q8WXA3 655 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 ANKS1AQ92625 1134 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 HMX1Q9NP08 348 aaPredicted RBP13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 RIPK3Q9Y572 518 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 MYH6P13533 1939 aa13.45□□□□□ -0.26
IGHV4-28-201ENST00000390612 TMEM232C9JQI7 657 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 SLC1A4P43007 532 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 OAZ1P54368 228 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 IMMTQ16891 758 aaKnown RBP13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 BTNL9Q6UXG8 535 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 FAM160B2Q86V87 743 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 ESR2Q92731 530 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 TEX13BQ9BXU2 312 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 TOMM22Q9NS69 142 aa13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 BAZ2BQ9UIF8 2168 aaKnown RBP13.44□□□□□ -0.26
IGHV4-28-201ENST00000390612 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 ZNF536O15090 1300 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 DNAJC25-GNG10A0A024R161 153 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 ZBED4O75132 1171 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 SNHG28P0DPA3 235 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 FCER1AP12319 257 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 STAT2P52630 851 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 ZNF792Q3KQV3 632 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 LHX8Q68G74 356 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 SKAP1Q86WV1 359 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 DCAF4Q8WV16 495 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 MAP4K1Q92918 833 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 OGDHLQ9ULD0 1010 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 DIS3Q9Y2L1 958 aaKnown RBP13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 LCTP09848 1927 aa13.43□□□□□ -0.26
IGHV4-28-201ENST00000390612 B4E1Z4 1266 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 KDM4AO75164 1064 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 TFRCP02786 760 aaKnown RBP13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 CCND3P30281 292 aaPredicted RBP13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 MFSD14CQ5VZR4 134 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 SNRNP48Q6IEG0 339 aaKnown RBP13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 KCTD1Q719H9 257 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 DPP9Q86TI2 863 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 TRPV1Q8NER1 839 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 MAML3Q96JK9 1138 aa13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
IGHV4-28-201ENST00000390612 CYP21A2P08686 494 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 PDHBP11177 359 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 CYBAP13498 195 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 CYP2C19P33261 490 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 MMP19Q99542 508 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 KRT23Q9C075 422 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 CNNM2Q9H8M5 875 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 SLC5A4Q9NY91 659 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
IGHV4-28-201ENST00000390612 FARP2O94887 1054 aaPredicted RBP13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 PGK2P07205 417 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 ZNF543Q08ER8 600 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 SEC23AQ15436 765 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 IQCA1Q86XH1 822 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 CPXCR1Q8N123 301 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 ENAHQ8N8S7 591 aaPredicted RBP13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 CHST13Q8NET6 341 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 ZKSCAN3Q9BRR0 538 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 TAF6LQ9Y6J9 622 aa13.4□□□□□ -0.26
IGHV4-28-201ENST00000390612 TRIOBPQ9H2D6 2365 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 KCTD2Q14681 263 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 CYB5R4Q7L1T6 521 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 FGD4Q96M96 766 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms