RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 GOPCQ9HD26 462 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 ZNFX1Q9P2E3 1918 aaKnown RBP11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 PQBP1O60828 265 aaKnown RBP11.21□□□□□ -0.61
TRBV3-1-201ENST00000390387 COPB2P35606 906 aa11.21□□□□□ -0.61
TRBV3-1-201ENST00000390387 NUP88Q99567 741 aaPredicted RBP11.21□□□□□ -0.61
TRBV3-1-201ENST00000390387 DDX19BQ9UMR2 479 aa11.21□□□□□ -0.61
TRBV3-1-201ENST00000390387 COG6Q9Y2V7 657 aa11.21□□□□□ -0.61
TRBV3-1-201ENST00000390387 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.62
TRBV3-1-201ENST00000390387 SYNRGQ9UMZ2 1314 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 RAD21O60216 631 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 MS4A1P11836 297 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 RAG1P15918 1043 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 RASA1P20936 1047 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 ANKRD33Q7Z3H0 272 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 MSL3Q8N5Y2 521 aaKnown RBP11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 KLHDC9Q8NEP7 349 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 RNPC3Q96LT9 517 aaKnown RBP11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 SLF1Q9BQI6 1058 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 TSEN34Q9BSV6 310 aaKnown RBP11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 TEX13BQ9BXU2 312 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 ARPP21Q9UBL0 812 aaPredicted RBP11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 RIPK3Q9Y572 518 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 CHD9Q3L8U1 2897 aa11.2□□□□□ -0.62
TRBV3-1-201ENST00000390387 MYH7P12883 1935 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 DNAJC25-GNG10A0A024R161 153 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 TMEM265A0A087WTH1 108 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 MYADML2A6NDP7 307 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 SNAI1O95863 264 aaPredicted RBP11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 NDUFB10O96000 172 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 FOSL2P15408 326 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 ACLYP53396 1101 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 FPGSQ05932 587 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 FAAP100Q0VG06 881 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 SBK1Q52WX2 424 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 SNRNP48Q6IEG0 339 aaKnown RBP11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 ZSCAN25Q6NSZ9 544 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 MAMDC4Q6UXC1 1216 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 TOX2Q96NM4 488 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 STRBPQ96SI9 672 aaKnown RBP11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 STARD7Q9NQZ5 370 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 TMEM39AQ9NV64 488 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
TRBV3-1-201ENST00000390387 MOXD2PA6NHM9 499 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 F5H6K3 240 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 ADCY6O43306 1168 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 IRX5P78411 483 aaPredicted RBP11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 KLRC3Q07444 240 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 MIER1Q8N108 512 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 PRPF38AQ8NAV1 312 aaKnown RBP11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 FGD4Q96M96 766 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 ZHX1Q9UKY1 873 aaPredicted RBP11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 TBX21Q9UL17 535 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 FAM184BQ9ULE4 1060 aa11.18□□□□□ -0.62
TRBV3-1-201ENST00000390387 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 DCDC2CA8MYV0 355 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 SMARCA5O60264 1052 aaPredicted RBP11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 DUSP11O75319 330 aaKnown RBP11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 TIMP1P01033 207 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 CST5P28325 142 aaPredicted RBP11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 GRIN2CQ14957 1233 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 KCNA10Q16322 511 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 GIMAP6Q6P9H5 292 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 NUP133Q8WUM0 1156 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 DDX11Q96FC9 970 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 LRRCC1Q9C099 1032 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 SLC38A10Q9HBR0 1119 aa11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
TRBV3-1-201ENST00000390387 ELP1O95163 1332 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 DNAJB2P25686 324 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 CDK7P50613 346 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 MFSD5Q6N075 450 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 CPXCR1Q8N123 301 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 OSBP2Q969R2 916 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 MKL1Q969V6 931 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 GLT1D1Q96MS3 346 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 MKNK2Q9HBH9 465 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
TRBV3-1-201ENST00000390387 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.15□□□□□ -0.62
TRBV3-1-201ENST00000390387 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.15□□□□□ -0.62
TRBV3-1-201ENST00000390387 ZBED4O75132 1171 aa11.15□□□□□ -0.62
TRBV3-1-201ENST00000390387 PRDM1O75626 825 aa11.15□□□□□ -0.62
TRBV3-1-201ENST00000390387 ASGR1P07306 291 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms