RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 NSUN4Q96CB9 384 aaKnown RBP15.71■□□□□ 0.11
NEK4-202ENST00000383721 PANX2Q96RD6 677 aa15.71■□□□□ 0.11
NEK4-202ENST00000383721 FBXO33Q7Z6M2 555 aa15.71■□□□□ 0.1
NEK4-202ENST00000383721 SP8Q8IXZ3 490 aa15.71■□□□□ 0.1
NEK4-202ENST00000383721 MRPL44Q9H9J2 332 aaKnown RBP15.71■□□□□ 0.1
NEK4-202ENST00000383721 ST7Q9NRC1 585 aa15.71■□□□□ 0.1
NEK4-202ENST00000383721 ANKIB1Q9P2G1 1089 aa15.71■□□□□ 0.1
NEK4-202ENST00000383721 XDHP47989 1333 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 SOWAHDA6NJG2 315 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 ADAMTS3O15072 1205 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 ORC4O43929 436 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 VEGFAP15692 232 aaPredicted RBP15.7■□□□□ 0.1
NEK4-202ENST00000383721 MECOMQ03112 1051 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 RBL2Q08999 1139 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 TERF2Q15554 542 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 E2F4Q16254 413 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 FAM47AQ5JRC9 791 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 IGSF22Q8N9C0 903 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 ZRANB2O95218 330 aaKnown RBP eCLIP15.7■□□□□ 0.1
NEK4-202ENST00000383721 KARSQ15046 597 aaKnown RBP15.7■□□□□ 0.1
NEK4-202ENST00000383721 CTCFLQ8NI51 663 aaPredicted RBP15.7■□□□□ 0.1
NEK4-202ENST00000383721 DCP1AQ9NPI6 582 aaPredicted RBP15.7■□□□□ 0.1
NEK4-202ENST00000383721 MRFAP1Q9Y605 127 aa15.7■□□□□ 0.1
NEK4-202ENST00000383721 MYH2Q9UKX2 1941 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 IL17AQ16552 155 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 RAD9BQ6WBX8 426 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 EPC1Q9H2F5 836 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 LRRC37AA6NMS7 1700 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 A0A1B0GUL6 1792 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 SEMA3EO15041 775 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 PNMA6AP0CW24 399 aaPredicted RBP15.69■□□□□ 0.1
NEK4-202ENST00000383721 CYP2D6P10635 497 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 SCG2P13521 617 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 PIK3AP1Q6ZUJ8 805 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 CPLX3Q8WVH0 158 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 MTRQ99707 1265 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 IRX2Q9BZI1 471 aaPredicted RBP15.69■□□□□ 0.1
NEK4-202ENST00000383721 MYH6P13533 1939 aa15.69■□□□□ 0.1
NEK4-202ENST00000383721 BAZ2AQ9UIF9 1905 aaKnown RBP15.69■□□□□ 0.1
NEK4-202ENST00000383721 COBLO75128 1261 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 PDXDC2PQ6P474 469 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
NEK4-202ENST00000383721 PPFIBP1Q86W92 1011 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 BLZF1Q9H2G9 400 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 POLLQ9UGP5 575 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 ADGRG1Q9Y653 693 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 CCDC175P0C221 793 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 NLRP5P59047 1200 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 IQUBQ8NA54 791 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 CTAGE1Q96RT6 745 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 ARGLU1Q9NWB6 273 aaPredicted RBP15.68■□□□□ 0.1
NEK4-202ENST00000383721 CTNND2Q9UQB3 1225 aa15.68■□□□□ 0.1
NEK4-202ENST00000383721 A0A0U1RQJ8 604 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 MFAP3LO75121 409 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 PPP2R3AQ06190 1150 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 PFKFB3Q16875 520 aaPredicted RBP15.67■□□□□ 0.1
NEK4-202ENST00000383721 TMCO3Q6UWJ1 677 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 TMC4Q7Z404 712 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 TXNRD3Q86VQ6 643 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 ATRIPQ8WXE1 791 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 SNED1Q8TER0 1413 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 UFL1O94874 794 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 TPM1P09493 284 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 PRDX5P30044 214 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 MCM7P33993 719 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 PLA2G4AP47712 749 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 TRAPPC10P48553 1259 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 RCSD1Q6JBY9 416 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 RSRC2Q7L4I2 434 aaKnown RBP15.67■□□□□ 0.1
NEK4-202ENST00000383721 NAA15Q9BXJ9 866 aaKnown RBP15.67■□□□□ 0.1
NEK4-202ENST00000383721 CRNKL1Q9BZJ0 848 aaKnown RBP15.67■□□□□ 0.1
NEK4-202ENST00000383721 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
NEK4-202ENST00000383721 GYPCP04921 128 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.14e-6■□□□□ 11.2
NEK4-202ENST00000383721 CASP14P31944 242 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 FILIP1LQ4L180 1135 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 DPP8Q6V1X1 898 aaPredicted RBP15.66■□□□□ 0.1
NEK4-202ENST00000383721 TBC1D16Q8TBP0 767 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 ATP8A2Q9NTI2 1148 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 LTBP1Q14766 1721 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 C6orf229H3BNL8 230 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 SEC31AO94979 1220 aaKnown RBP15.66■□□□□ 0.1
NEK4-202ENST00000383721 FXR1P51114 621 aaKnown RBP eCLIP15.66■□□□□ 0.1
NEK4-202ENST00000383721 RRAGBQ5VZM2 374 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 CCDC12Q8WUD4 166 aaPredicted RBP15.66■□□□□ 0.1
NEK4-202ENST00000383721 LZTFL1Q9NQ48 299 aa15.66■□□□□ 0.1
NEK4-202ENST00000383721 HIBADHP31937 336 aaKnown RBP15.65■□□□□ 0.1
NEK4-202ENST00000383721 CCT6AP40227 531 aaKnown RBP15.65■□□□□ 0.1
NEK4-202ENST00000383721 KRT31Q15323 416 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 SBK1Q52WX2 424 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 PODXL2Q9NZ53 605 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 GGA1Q9UJY5 639 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
NEK4-202ENST00000383721 LRRC10BA6NIK2 292 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 TSPY2A6NKD2 308 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
NEK4-202ENST00000383721 TEX35Q5T0J7 233 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 GPR161Q8N6U8 529 aaKnown RBP15.65■□□□□ 0.1
NEK4-202ENST00000383721 C4orf32Q8N8J7 132 aa15.65■□□□□ 0.1
NEK4-202ENST00000383721 TMX4Q9H1E5 349 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms