RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 SPDYE16A6NNV3 312 aaPredicted RBP18.03■□□□□ 0.48
PDGFB-202ENST00000381551 KLRF2D3W0D1 207 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 TBC1D8O95759 1140 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 KIF5BP33176 963 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 GCLCP48506 637 aaPredicted RBP18.03■□□□□ 0.48
PDGFB-202ENST00000381551 MICU3Q86XE3 530 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 CCDC144CPQ8IYA2 1237 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 CTCFLQ8NI51 663 aaPredicted RBP18.03■□□□□ 0.48
PDGFB-202ENST00000381551 SMCR8Q8TEV9 937 aaPredicted RBP18.03■□□□□ 0.48
PDGFB-202ENST00000381551 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 BEGAINQ9BUH8 593 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 UBA5Q9GZZ9 404 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 RBPJLQ9UBG7 517 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 PRR12Q9ULL5 1215 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 TPCN1Q9ULQ1 816 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 RLFQ13129 1914 aa18.03■□□□□ 0.48
PDGFB-202ENST00000381551 ADGRA2Q96PE1 1338 aa18.02■□□□□ 0.48
PDGFB-202ENST00000381551 VWA5AO00534 786 aa18.02■□□□□ 0.48
PDGFB-202ENST00000381551 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
PDGFB-202ENST00000381551 C17orf99Q6UX52 265 aa18.02■□□□□ 0.48
PDGFB-202ENST00000381551 ATG4CQ96DT6 458 aa18.02■□□□□ 0.48
PDGFB-202ENST00000381551 CPVLQ9H3G5 476 aa18.02■□□□□ 0.48
PDGFB-202ENST00000381551 FAM217BQ9NTX9 383 aaPredicted RBP18.02■□□□□ 0.48
PDGFB-202ENST00000381551 NAP1L2Q9ULW6 460 aaPredicted RBP18.02■□□□□ 0.48
PDGFB-202ENST00000381551 GOLGA8BA8MQT2 603 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 BCRP11274 1271 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 SMARCA1P28370 1054 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 GNAQP50148 359 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 IKQ13123 557 aaPredicted RBP18.01■□□□□ 0.47
PDGFB-202ENST00000381551 RTN1Q16799 776 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 SLC35G1Q2M3R5 365 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 SYDE2Q5VT97 1194 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 SAMD1Q6SPF0 538 aaPredicted RBP18.01■□□□□ 0.47
PDGFB-202ENST00000381551 NBPF11Q86T75 865 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 GTF3C2Q8WUA4 911 aaPredicted RBP18.01■□□□□ 0.47
PDGFB-202ENST00000381551 LZTS2Q9BRK4 669 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 TXNRD2Q9NNW7 524 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 CPA4Q9UI42 421 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
PDGFB-202ENST00000381551 GOLGA8AA7E2F4 631 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 ST18O60284 1047 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 PEX10O60683 326 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 CNMDO75829 334 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 FDX1P10109 184 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 CDC27P30260 824 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 ADD1P35611 737 aaKnown RBP18■□□□□ 0.47
PDGFB-202ENST00000381551 METAP2P50579 478 aaKnown RBP eCLIP18■□□□□ 0.47
PDGFB-202ENST00000381551 Q3C1V9 767 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 ADGRF4Q8IZF3 695 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
PDGFB-202ENST00000381551 ANKRD13CQ8N6S4 541 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 MB21D1Q8N884 522 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 REPS2Q8NFH8 660 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 RIOX1Q9H6W3 641 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 JMJD4Q9H9V9 463 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 SLC38A10Q9HBR0 1119 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 RBM28Q9NW13 759 aaKnown RBP18■□□□□ 0.47
PDGFB-202ENST00000381551 BTBD7Q9P203 1132 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 LIMCH1Q9UPQ0 1083 aa18■□□□□ 0.47
PDGFB-202ENST00000381551 CYTH3O43739 400 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 ZBED4O75132 1171 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 CAPN15O75808 1086 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 PLEKHA8P1O95397 391 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 CCT2P78371 535 aaKnown RBP17.99■□□□□ 0.47
PDGFB-202ENST00000381551 TMEM132BQ14DG7 1078 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 ME3Q16798 604 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 TMTC3Q6ZXV5 915 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 CMTR1Q8N1G2 835 aaKnown RBP17.99■□□□□ 0.47
PDGFB-202ENST00000381551 GPRC5AQ8NFJ5 357 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 MORF4L1Q9UBU8 362 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 PARP14Q460N5 1801 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 NID2Q14112 1375 aa17.99■□□□□ 0.47
PDGFB-202ENST00000381551 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
PDGFB-202ENST00000381551 PFKFB2O60825 505 aa17.98■□□□□ 0.47
PDGFB-202ENST00000381551 SNAP25P60880 206 aa17.98■□□□□ 0.47
PDGFB-202ENST00000381551 STK3Q13188 491 aa17.98■□□□□ 0.47
PDGFB-202ENST00000381551 NOM1Q5C9Z4 860 aaKnown RBP17.98■□□□□ 0.47
PDGFB-202ENST00000381551 NOL8Q76FK4 1167 aaKnown RBP17.98■□□□□ 0.47
PDGFB-202ENST00000381551 MTMR8Q96EF0 704 aa17.98■□□□□ 0.47
PDGFB-202ENST00000381551 PAGR1Q9BTK6 254 aa17.98■□□□□ 0.47
PDGFB-202ENST00000381551 RANBP17Q9H2T7 1088 aaKnown RBP17.98■□□□□ 0.47
PDGFB-202ENST00000381551 GPR25O00155 361 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 ATP2A1O14983 1001 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 CD2BP2O95400 341 aaKnown RBP17.97■□□□□ 0.47
PDGFB-202ENST00000381551 OAZ1P54368 228 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 ERVK-9P63128 1117 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 ERVK-24P63145 666 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 FUT2Q10981 343 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 NTRK3Q16288 839 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 FAM110CQ1W6H9 321 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 CCDC82Q8N4S0 544 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 SPZ1Q9BXG8 430 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
PDGFB-202ENST00000381551 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
PDGFB-202ENST00000381551 TSKSQ9UJT2 592 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 ZNF214Q9UL59 606 aaPredicted RBP17.97■□□□□ 0.47
PDGFB-202ENST00000381551 ZNF536O15090 1300 aa17.97■□□□□ 0.47
PDGFB-202ENST00000381551 DHX16O60231 1041 aaKnown RBP17.96■□□□□ 0.47
PDGFB-202ENST00000381551 LARGE1O95461 756 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms