RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 BRIP1Q9BX63 1249 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 KCNJ18B7U540 433 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 CDK8P49336 464 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 GYS2P54840 703 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 KCNJ12Q14500 433 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 SPATA1Q5VX52 437 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 FAM207AQ9NSI2 230 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 INTS13Q9NVM9 706 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 WDR19Q8NEZ3 1342 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 CABP7Q86V35 215 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
DNMT3A-203ENST00000380746 B4DLN1 442 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 ZMYND10O75800 440 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 PRCPP42785 496 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 CRACR2AQ9BSW2 395 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 TRIM10Q9UDY6 481 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 PSMA7O14818 248 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 GTF2F1P35269 517 aaKnown RBP eCLIP12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 FXR1P51114 621 aaKnown RBP eCLIP12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 GSTO1P78417 241 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 CYP27A1Q02318 531 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 TBC1D8BQ0IIM8 1120 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 DPYDQ12882 1025 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 KRT31Q15323 416 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 TDRD12Q587J7 1177 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 MRPL44Q9H9J2 332 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 IL17RBQ9NRM6 502 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 USP40Q9NVE5 1235 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 PKD2L1Q9P0L9 805 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 UTRNP46939 3433 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 CNTNAP5Q8WYK1 1306 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 POTEMA6NI47 508 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 MYO1BO43795 1136 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 ENOX1Q8TC92 643 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 CCDC102AQ96A19 550 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 CALML4Q96GE6 196 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 STK36Q9NRP7 1315 aa12.31□□□□□ -0.44
DNMT3A-203ENST00000380746 DDAH1O94760 285 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 EPS15P42566 896 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 FCHSD1Q86WN1 690 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 ZNF287Q9HBT7 754 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 JADE2Q9NQC1 790 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 TRPM3Q9HCF6 1732 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 FCER1AP12319 257 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 PLCG1P19174 1290 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 NYAP1Q6ZVC0 841 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 KRT222Q8N1A0 295 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 CCDC148Q8NFR7 591 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■■■ 151.4
DNMT3A-203ENST00000380746 GRAPQ13588 217 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 NONOQ15233 471 aaKnown RBP eCLIP12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 TC2NQ8N9U0 490 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 PCDHA4Q9UN74 947 aa12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 LUC7L2Q9Y383 392 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-203ENST00000380746 BMP15O95972 392 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 ABL1P00519 1130 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 KLK7P49862 253 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 REXO1Q8N1G1 1221 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 SLC35F6Q8N357 371 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 CHP1Q99653 195 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 NLRC4Q9NPP4 1024 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 LRWD1Q9UFC0 647 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 ZNF76P36508 570 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 GNAQP50148 359 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 CLCN6P51797 869 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 COPB1P53618 953 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 TCERG1LQ5VWI1 586 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 RAD9BQ6WBX8 426 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 NOC4LQ9BVI4 516 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 XDHP47989 1333 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 GDF11O95390 407 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 UBXN2AP68543 259 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 SNX29Q8TEQ0 813 aa12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.29□□□□□ -0.44
DNMT3A-203ENST00000380746 EP400Q96L91 3159 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms