RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TAOK3Q9H2K8 898 aa22.68■■□□□ 1.22
PDLIM5-205ENST00000380180 CCDC194A0A1B0GVG4 234 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 ATP2C1P98194 919 aaPredicted RBP22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 USP49Q70CQ1 688 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 MKL1Q969V6 931 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 FERMT2Q96AC1 680 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 NYAP2Q9P242 653 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 SMCO2A6NFE2 343 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 GDF11O95390 407 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 MCM7P33993 719 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 SEPT2Q15019 361 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 IQCB1Q15051 598 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 TTBK2Q6IQ55 1244 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 CNNM3Q8NE01 707 aa22.67■■□□□ 1.22
PDLIM5-205ENST00000380180 ARFGEF1Q9Y6D6 1849 aa22.66■■□□□ 1.22
PDLIM5-205ENST00000380180 POLR2DO15514 142 aaKnown RBP22.66■■□□□ 1.22
PDLIM5-205ENST00000380180 ABCB5Q2M3G0 1257 aa22.66■■□□□ 1.22
PDLIM5-205ENST00000380180 GPATCH4Q5T3I0 446 aaKnown RBP22.66■■□□□ 1.22
PDLIM5-205ENST00000380180 TMEM179Q6ZVK1 233 aa22.66■■□□□ 1.22
PDLIM5-205ENST00000380180 SIAH1Q8IUQ4 282 aa22.66■■□□□ 1.22
PDLIM5-205ENST00000380180 KCTD1Q719H9 257 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 ADGRF4Q8IZF3 695 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 FAM43AQ8N2R8 423 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 C6orf50Q9HD87 102 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 GNA11P29992 359 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 PNOCQ13519 176 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 ZRSR1Q15695 479 aaKnown RBP22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 CCDC96Q2M329 555 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 SPDYE2Q495Y8 402 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 HS1BP3Q53T59 392 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 FAM151AQ8WW52 585 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 JDP2Q8WYK2 163 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 SGIP1Q9BQI5 828 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 JMJD4Q9H9V9 463 aa22.65■■□□□ 1.22
PDLIM5-205ENST00000380180 BIN1O00499 593 aa22.64■■□□□ 1.22
PDLIM5-205ENST00000380180 CIAPIN1Q6FI81 312 aa22.64■■□□□ 1.22
PDLIM5-205ENST00000380180 MTMR14Q8NCE2 650 aa22.64■■□□□ 1.22
PDLIM5-205ENST00000380180 EPSTI1Q96J88 318 aa22.64■■□□□ 1.22
PDLIM5-205ENST00000380180 TUBE1Q9UJT0 475 aa22.64■■□□□ 1.22
PDLIM5-205ENST00000380180 CNTNAP1P78357 1384 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 VWA3AA6NCI4 1184 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 hCG_1984214I3L0E3 225 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 NFKBIEO00221 500 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 SLC16A2P36021 539 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 JAG1P78504 1218 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 ICA1Q05084 483 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 RRP1BQ14684 758 aaKnown RBP22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 INF2Q27J81 1249 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 ELOA2Q8IYF1 753 aaPredicted RBP22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 PDILTQ8N807 584 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 ZNF713Q8N859 430 aaPredicted RBP22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 RTN4Q9NQC3 1192 aaKnown RBP22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 SERTAD1Q9UHV2 236 aa22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 HERC5Q9UII4 1024 aaKnown RBP22.64■■□□□ 1.21
PDLIM5-205ENST00000380180 ESPNB1AK53 854 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 RAD21O60216 631 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 NLRP12P59046 1061 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 MDM2Q00987 491 aaPredicted RBP22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 DPCR1Q3MIW9 517 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 RBM26Q5T8P6 1007 aaKnown RBP22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 CEP57L1Q8IYX8 460 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 C4orf32Q8N8J7 132 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 COA7Q96BR5 231 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 BCS1LQ9Y276 419 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 CD2APQ9Y5K6 639 aa22.63■■□□□ 1.21
PDLIM5-205ENST00000380180 PNMA6FA0A0J9YX94 578 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 ESYT2A0FGR8 921 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 SYMPKQ92797 1274 aaKnown RBP22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 NAT10Q9H0A0 1025 aaKnown RBP22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 VEZTQ9HBM0 779 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 RRAGDQ9NQL2 400 aaPredicted RBP22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 FOXN1O15353 648 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 GH2P01242 217 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 IL17AQ16552 155 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 SLFN13Q68D06 897 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 ISM2Q6H9L7 571 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 KRT25Q7Z3Z0 450 aa22.62■■□□□ 1.21
PDLIM5-205ENST00000380180 GOLGA6L19H0YKK7 550 aa22.61■■□□□ 1.21
PDLIM5-205ENST00000380180 SLC1A4P43007 532 aa22.61■■□□□ 1.21
PDLIM5-205ENST00000380180 ARL6IP4Q66PJ3 421 aaKnown RBP22.61■■□□□ 1.21
PDLIM5-205ENST00000380180 DHX40Q8IX18 779 aaKnown RBP22.61■■□□□ 1.21
PDLIM5-205ENST00000380180 DCAF4Q8WV16 495 aa22.61■■□□□ 1.21
PDLIM5-205ENST00000380180 CCDC39Q9UFE4 941 aa22.61■■□□□ 1.21
PDLIM5-205ENST00000380180 A0A087X0B3 334 aa22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 USP17L10C9JJH3 530 aa22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 FKBP1CQ5VVH2 108 aa22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 ZBED3Q96IU2 234 aaPredicted RBP22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 HOOK1Q9UJC3 728 aaKnown RBP22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 BECN2A8MW95 431 aa22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 ACTN4O43707 911 aaKnown RBP22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 PPP1R11O60927 126 aaPredicted RBP22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 PTMAP06454 111 aaKnown RBP22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 MTMR8Q96EF0 704 aa22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 BIN2Q9UBW5 565 aaPredicted RBP22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 PCDHA5Q9Y5H7 936 aa22.6■■□□□ 1.21
PDLIM5-205ENST00000380180 SHTN1A0MZ66 631 aa22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 F5H6K3 240 aa22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 WNT10BO00744 389 aa22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 MYO1BO43795 1136 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms