RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 TANGO6Q9C0B7 1094 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 JMJD4Q9H9V9 463 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 GJB4Q9NTQ9 266 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 PCNTO95613 3336 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 BAZ2BQ9UIF8 2168 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 CXCL11O14625 94 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 PRPF3O43395 683 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 RIOX1Q9H6W3 641 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 KCNH4Q9UQ05 1017 aa16.34■□□□□ 0.21
HERPUD1-203ENST00000379792 A0A0G2JLL6 359 aaPredicted RBP16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 DDIT3P35638 169 aa16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 ZNF157P51786 506 aaPredicted RBP16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 GUCY1B3Q02153 619 aa16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 PKN1Q16512 942 aa16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 TREML2Q5T2D2 321 aa16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 LARP1BQ659C4 914 aaKnown RBP16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 CYP4F22Q6NT55 531 aa16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 PAXIP1Q6ZW49 1069 aaPredicted RBP16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 PRRT2Q7Z6L0 340 aaPredicted RBP16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 C12orf42Q96LP6 360 aa16.33■□□□□ 0.21
HERPUD1-203ENST00000379792 DEXIO95424 95 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 STAT2P52630 851 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 PKP1Q13835 747 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 FOXD4L5Q5VV16 416 aaPredicted RBP16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 SPRYD7Q5W111 196 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 FOXD4L4Q8WXT5 416 aaPredicted RBP16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 RRP36Q96EU6 259 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 FEM1BQ9UK73 627 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
HERPUD1-203ENST00000379792 FLOT1O75955 427 aa16.32■□□□□ 0.2
HERPUD1-203ENST00000379792 SYT1P21579 422 aa16.32■□□□□ 0.2
HERPUD1-203ENST00000379792 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
HERPUD1-203ENST00000379792 MAP2K2P36507 400 aa16.32■□□□□ 0.2
HERPUD1-203ENST00000379792 SNAPC2Q13487 334 aa16.32■□□□□ 0.2
HERPUD1-203ENST00000379792 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
HERPUD1-203ENST00000379792 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.21e-6■■■■□ 19.7
HERPUD1-203ENST00000379792 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 MOGSQ13724 837 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 RGMBQ6NW40 437 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 SCG2P13521 617 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 MAP2K1Q02750 393 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 PFKFB3Q16875 520 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 RASAL3Q86YV0 1011 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 MS4A4AQ96JQ5 239 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 C8orf76Q96K31 380 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 WBP1LQ9NX94 342 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
HERPUD1-203ENST00000379792 VPS37CA5D8V6 355 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 PPP1R11O60927 126 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 CDC37Q16543 378 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 QRICH1Q2TAL8 776 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 CATSPERGQ6ZRH7 1159 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 WASF1Q92558 559 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 CCDC102AQ96A19 550 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
HERPUD1-203ENST00000379792 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 PNMA6FA0A0J9YX94 578 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 H3BQV1 296 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 ZBTB5O15062 677 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 STX6O43752 255 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 PLA2G6O60733 806 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 PDCP20941 246 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 GTF2A2P52657 109 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 NOGQ13253 232 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 GRM1Q13255 1194 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 CCL15Q16663 113 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 IFFO2Q5TF58 517 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 GPAT2Q6NUI2 795 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 FASTKD5Q7L8L6 764 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 PRPF38AQ8NAV1 312 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms