RNA–Protein interactions for RNA: ENST00000379716.5

SH3KBP1-203, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 2 BASIC

Gene SH3KBP1, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-203ENST00000379716 GKAP1Q5VSY0 366 aaPredicted RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 ZNF713Q8N859 430 aaPredicted RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 TRIM58Q8NG06 486 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 RPGRQ92834 1020 aaKnown RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 VCX3BQ9H321 246 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 ATP6V0A2Q9Y487 856 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 MTRF1O75570 445 aaKnown RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 MBD3O95983 291 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 MYCP01106 439 aaPredicted RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 PSMD7P51665 324 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 PPP4CP60510 307 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 ITPK1Q13572 414 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 ARHGEF6Q15052 776 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 SMYD1Q8NB12 490 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 LSM14AQ8ND56 463 aaKnown RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 HDAC7Q8WUI4 952 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 DDX27Q96GQ7 796 aaKnown RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 IWS1Q96ST2 819 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 TUBA8Q9NY65 449 aaPredicted RBP10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 MYO1AQ9UBC5 1043 aa10.53□□□□□ -0.72
SH3KBP1-203ENST00000379716 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.72
SH3KBP1-203ENST00000379716 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.72
SH3KBP1-203ENST00000379716 TBC1D10BQ4KMP7 808 aaPredicted RBP10.52□□□□□ -0.72
SH3KBP1-203ENST00000379716 KLC4Q9NSK0 619 aa10.52□□□□□ -0.72
SH3KBP1-203ENST00000379716 BABAM1Q9NWV8 329 aa10.52□□□□□ -0.72
SH3KBP1-203ENST00000379716 TPCN1Q9ULQ1 816 aa10.52□□□□□ -0.72
SH3KBP1-203ENST00000379716 FAN1Q9Y2M0 1017 aa10.52□□□□□ -0.72
SH3KBP1-203ENST00000379716 CYP1A2P05177 515 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 WTAPQ15007 396 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 SNCBQ16143 134 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 KSR2Q6VAB6 950 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 FAM89AQ96GI7 184 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 GSDMAQ96QA5 445 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 ALDH8A1Q9H2A2 487 aaPredicted RBP10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 TUBGCP4Q9UGJ1 667 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 DDX20Q9UHI6 824 aaKnown RBP10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 COL3A1P02461 1466 aaPredicted RBP10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 HCLS1P14317 486 aaPredicted RBP10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 CCT4P50991 539 aaKnown RBP10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 CEP128Q6ZU80 1094 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 SUN5Q8TC36 379 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 MUC3BQ9H195 1237 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 JADE2Q9NQC1 790 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 HOOK1Q9UJC3 728 aaKnown RBP10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 PARP3Q9Y6F1 533 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 NHSL1Q5SYE7 1610 aa10.52□□□□□ -0.73
SH3KBP1-203ENST00000379716 CARNS1A5YM72 827 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 MCM3P25205 808 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 YY1P25490 414 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 NFKBIAP25963 317 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 CDC25CP30307 473 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 ARHGAP45Q92619 1136 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 TNS2Q63HR2 1409 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 HNRNPCP07910 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 GNAI3P08754 354 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 LRMPQ12912 555 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 ZBTB17Q13105 803 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 LBRQ14739 615 aaKnown RBP10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 ARHGAP18Q8N392 663 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 CNNM3Q8NE01 707 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 PDGFDQ9GZP0 370 aaPredicted RBP10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 NDUFAF2Q8N183 169 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 RABEP2Q9H5N1 569 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 AS3MTQ9HBK9 375 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 DKK3Q9UBP4 350 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 TBK1Q9UHD2 729 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 ZNF510Q9Y2H8 683 aa10.51□□□□□ -0.73
SH3KBP1-203ENST00000379716 hCG_2014768A0A024R1R8 64 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 CLTAP09496 248 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 ENDOUP21128 410 aaKnown RBP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 POLE2P56282 527 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 NCCRP1Q6ZVX7 275 aaPredicted RBP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 LINC00116Q8NCU8 138 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 TNIP2Q8NFZ5 429 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 IER2Q9BTL4 223 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 CYP19A1P11511 503 aaPredicted RBP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 HOXD10P28358 340 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 PSMC4P43686 418 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 CSE1LP55060 971 aaKnown RBP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 WLSQ5T9L3 541 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 PPP1R42Q7Z4L9 355 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 GSDMBQ8TAX9 411 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 SLC35B4Q969S0 331 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 HVCN1Q96D96 273 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 ZHX3Q9H4I2 956 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 LUC7LQ9NQ29 371 aaKnown RBP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 KDM6AO15550 1401 aaPredicted RBP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 COL14A1Q05707 1796 aaKnown RBP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 RPS6KA5O75582 802 aa10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 G3BP1Q13283 466 aaKnown RBP eCLIP10.5□□□□□ -0.73
SH3KBP1-203ENST00000379716 SH2D4BQ5SQS7 431 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms