RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RNF146Q9NTX7 359 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 RNF216Q9NWF9 866 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-202ENST00000379446 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
NEDD9-202ENST00000379446 INO80B-WBP1J3KQ70 363 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 RIOK3O14730 519 aaKnown RBP7.36□□□□□ -1.23
NEDD9-202ENST00000379446 SMTNP53814 917 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 KRT85P78386 507 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 COG2Q14746 738 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 SEPT2Q15019 361 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 ZBTB8OSQ8IWT0 167 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 CDAN1Q8IWY9 1227 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 APPBP2Q92624 585 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 INO80BQ9C086 356 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-202ENST00000379446 SGSM2O43147 1006 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 GAS7O60861 476 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 MYBP10242 640 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 FAM83BQ5T0W9 1011 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 KRT79Q5XKE5 535 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 RNF207Q6ZRF8 634 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 ELMOD1Q8N336 334 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 FZD1Q9UP38 647 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 RBM8AQ9Y5S9 174 aaKnown RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 ADAMTS13Q76LX8 1427 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 ASB14A6NK59 587 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 F13A1P00488 732 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 SYN1P17600 705 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 TWF2Q6IBS0 349 aaKnown RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 NCAPH2Q6IBW4 605 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 THNSL1Q8IYQ7 743 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 MYRIPQ8NFW9 859 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 DEPTORQ8TB45 409 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 INTS4Q96HW7 963 aaKnown RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 SYNDIG1Q9H7V2 258 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 TRMT1Q9NXH9 659 aaKnown RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 IBTKQ9P2D0 1353 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 AK9Q5TCS8 1911 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 PABPN1LA6NDY0 278 aaKnown RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 CCDC192P0DO97 292 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 ADORA1P30542 326 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 ATXN3P54252 364 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 TMEM179Q6ZVK1 233 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 BRF1Q92994 677 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 SPATA32Q96LK8 384 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 NEK1Q96PY6 1258 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 SLF1Q9BQI6 1058 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 IL25Q9H293 177 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 TNMDQ9H2S6 317 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 OSBPL3Q9H4L5 887 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 FAM184BQ9ULE4 1060 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 SP100P23497 879 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 UBE2HP62256 183 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 MIER3Q7Z3K6 550 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 REM2Q8IYK8 340 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-202ENST00000379446 GOLGA1Q92805 767 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 FAM227BQ96M60 508 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 NUP62CLQ9H1M0 184 aa7.35□□□□□ -1.23
NEDD9-202ENST00000379446 RTL9Q8NET4 1388 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 MACROD2A1Z1Q3 448 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 ANKRD62A6NC57 917 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 CYP2C8P10632 490 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 HSPA4P34932 840 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 SNAP25P60880 206 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 PTH1RQ03431 593 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 NMIQ13287 307 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 FNBP1Q96RU3 617 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 USP32Q8NFA0 1604 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 RP1L1Q8IWN7 2480 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 C19orf81C9J6K1 198 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 CYP2E1P05181 493 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 PDE6AP16499 860 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 COPB2P35606 906 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 MDM2Q00987 491 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 CFAP58Q5T655 872 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 CATSPER4Q7RTX7 472 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 GTF3C2Q8WUA4 911 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 TSG101Q99816 390 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 TTLL1O95922 423 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 ADCY7P51828 1080 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 MECOMQ03112 1051 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 TRPC3Q13507 836 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 FILIP1Q7Z7B0 1213 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 GPATCH11Q8N954 259 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 PCSK9Q8NBP7 692 aaKnown RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 SSH3Q8TE77 659 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 RNPC3Q96LT9 517 aaKnown RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 ZSCAN31Q96LW9 406 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-202ENST00000379446 TIGD1Q96MW7 591 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 AMNQ9BXJ7 453 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 GLT8D2Q9H1C3 349 aa7.34□□□□□ -1.23
NEDD9-202ENST00000379446 IFT172Q9UG01 1749 aa7.34□□□□□ -1.24
NEDD9-202ENST00000379446 LRRIQ4A6NIV6 560 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 ZNF500O60304 480 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 LARGE1O95461 756 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 TXNP10599 105 aaKnown RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 KRT13P13646 458 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 TNNT1P13805 278 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 POLGP54098 1239 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 RUFY3Q7L099 469 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 OTUD6AQ7L8S5 288 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 MAPK4P31152 587 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms