RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ADCY3O60266 1144 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 CCL5P13501 91 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 EEF2P13639 858 aaKnown RBP16.17■□□□□ 0.18
UPK1A-202ENST00000379013 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
UPK1A-202ENST00000379013 TRIM32Q13049 653 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 PNMA1Q8ND90 353 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 CTCFLQ8NI51 663 aaPredicted RBP16.17■□□□□ 0.18
UPK1A-202ENST00000379013 ZNF274Q96GC6 653 aaPredicted RBP16.17■□□□□ 0.18
UPK1A-202ENST00000379013 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
UPK1A-202ENST00000379013 TMEM106CQ9BVX2 250 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 KIAA1683Q9H0B3 1180 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 UNC93B1Q9H1C4 597 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 PORCNQ9H237 461 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 IL17RBQ9NRM6 502 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 PNMA3Q9UL41 463 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 LIMCH1Q9UPQ0 1083 aa16.17■□□□□ 0.18
UPK1A-202ENST00000379013 MGAMO43451 1857 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 KLF18A0A0U1RQI7 1052 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 ZBTB43O43298 467 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 NMT2O60551 498 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 CPA1P15085 419 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 AK2P54819 239 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 EVCP57679 992 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 IRF5Q13568 498 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 RCSD1Q6JBY9 416 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 CPLX2Q6PUV4 134 aaKnown RBP16.16■□□□□ 0.18
UPK1A-202ENST00000379013 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 GMCL1P1Q8NEA9 526 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 SNX21Q969T3 373 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 TCEANC2Q96MN5 208 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 TMEM47Q9BQJ4 181 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 RBM28Q9NW13 759 aaKnown RBP16.16■□□□□ 0.18
UPK1A-202ENST00000379013 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
UPK1A-202ENST00000379013 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
UPK1A-202ENST00000379013 MYH6P13533 1939 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 VCAM1P19320 739 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 GNAQP50148 359 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
UPK1A-202ENST00000379013 PABPC4Q13310 644 aaKnown RBP eCLIP16.15■□□□□ 0.18
UPK1A-202ENST00000379013 TOB2Q14106 344 aaPredicted RBP16.15■□□□□ 0.18
UPK1A-202ENST00000379013 GPATCH4Q5T3I0 446 aaKnown RBP16.15■□□□□ 0.18
UPK1A-202ENST00000379013 APOA5Q6Q788 366 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 DCAF4Q8WV16 495 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 DNAH12Q6ZR08 3092 aa16.15■□□□□ 0.18
UPK1A-202ENST00000379013 CDKL5O76039 1030 aa16.14■□□□□ 0.17
UPK1A-202ENST00000379013 INHAP05111 366 aa16.14■□□□□ 0.17
UPK1A-202ENST00000379013 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.17
UPK1A-202ENST00000379013 ASPRV1Q53RT3 343 aa16.14■□□□□ 0.17
UPK1A-202ENST00000379013 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
UPK1A-202ENST00000379013 GPRC5AQ8NFJ5 357 aa16.14■□□□□ 0.17
UPK1A-202ENST00000379013 USP6NLQ92738 828 aa16.14■□□□□ 0.17
UPK1A-202ENST00000379013 SLKQ9H2G2 1235 aaPredicted RBP16.14■□□□□ 0.17
UPK1A-202ENST00000379013 VCPKMTQ9H867 229 aa16.14■□□□□ 0.17
UPK1A-202ENST00000379013 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
UPK1A-202ENST00000379013 NID2Q14112 1375 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L15C9J2P7 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L13C9JLJ4 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L11C9JVI0 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L18D6R9N7 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L22D6RA61 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L17D6RBQ6 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L19D6RCP7 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L20D6RJB6 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 RAD21O60216 631 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 PARP1P09874 1014 aaKnown RBP16.13■□□□□ 0.17
UPK1A-202ENST00000379013 SLC1A4P43007 532 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 ERVK-24P63145 666 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 APOBRQ0VD83 1088 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 USP17L24Q0WX57 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 MICU3Q86XE3 530 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
UPK1A-202ENST00000379013 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 PXYLP1Q8TE99 480 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 GMCL1Q96IK5 515 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 LZTS2Q9BRK4 669 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
UPK1A-202ENST00000379013 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
UPK1A-202ENST00000379013 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
UPK1A-202ENST00000379013 GOLGA8AA7E2F4 631 aa16.12■□□□□ 0.17
UPK1A-202ENST00000379013 K7ELQ4 463 aaPredicted RBP16.12■□□□□ 0.17
UPK1A-202ENST00000379013 CPLX1O14810 134 aa16.12■□□□□ 0.17
UPK1A-202ENST00000379013 WDR46O15213 610 aaKnown RBP16.12■□□□□ 0.17
UPK1A-202ENST00000379013 GJB1P08034 283 aa16.12■□□□□ 0.17
UPK1A-202ENST00000379013 RTN1Q16799 776 aa16.12■□□□□ 0.17
UPK1A-202ENST00000379013 NUP133Q8WUM0 1156 aa16.12■□□□□ 0.17
UPK1A-202ENST00000379013 COA7Q96BR5 231 aa16.12■□□□□ 0.17
UPK1A-202ENST00000379013 RBM27Q9P2N5 1060 aaKnown RBP16.12■□□□□ 0.17
UPK1A-202ENST00000379013 PLXNB2O15031 1838 aa16.12■□□□□ 0.17
UPK1A-202ENST00000379013 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
UPK1A-202ENST00000379013 F5H6K3 240 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
UPK1A-202ENST00000379013 CYP2B6P20813 491 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 GJA8P48165 433 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 KLRC3Q07444 240 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms