RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
CKAP2-202ENST00000378034 OTOP1Q7RTM1 612 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 SGMS1Q86VZ5 419 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 CCAR1Q8IX12 1150 aaKnown RBP15.47■□□□□ 0.07
CKAP2-202ENST00000378034 FBXL16Q8N461 479 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 REPS2Q8NFH8 660 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 TRIM47Q96LD4 638 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 SLC38A10Q9HBR0 1119 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
CKAP2-202ENST00000378034 CCDC69A6NI79 296 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 DDAH1O94760 285 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 SEC24BO95487 1268 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 SLC25A27O95847 323 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 TROAPQ12815 778 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 COA7Q96BR5 231 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 IL17RAQ96F46 866 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 ARHGAP39Q9C0H5 1083 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 SENP2Q9HC62 589 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 ZSWIM6Q9HCJ5 1215 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 GPCPD1Q9NPB8 672 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 PRR12Q9ULL5 1215 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 TRIM17Q9Y577 477 aa15.47■□□□□ 0.07
CKAP2-202ENST00000378034 TNPO2O14787 897 aaKnown RBP15.46■□□□□ 0.07
CKAP2-202ENST00000378034 CALM1P0DP23 149 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 CALM2P0DP24 149 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 CALM3P0DP25 149 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 CASTP20810 708 aaKnown RBP15.46■□□□□ 0.07
CKAP2-202ENST00000378034 RPS6KB1P23443 525 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 CTGFP29279 349 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 COL9A3Q14050 684 aaPredicted RBP15.46■□□□□ 0.07
CKAP2-202ENST00000378034 SYDE2Q5VT97 1194 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 NFXL1Q6ZNB6 911 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 RASGRP2Q7LDG7 609 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 ZNF654Q8IZM8 581 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 CHMP4CQ96CF2 233 aa15.46■□□□□ 0.07
CKAP2-202ENST00000378034 ZNF214Q9UL59 606 aaPredicted RBP15.46■□□□□ 0.07
CKAP2-202ENST00000378034 PEX10O60683 326 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 STAT3P40763 770 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 GRM4Q14833 912 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 TTBK2Q6IQ55 1244 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 RUFY3Q7L099 469 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 MOV10L1Q9BXT6 1211 aaKnown RBP15.45■□□□□ 0.06
CKAP2-202ENST00000378034 TEX13BQ9BXU2 312 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 MROH8Q9H579 483 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 SRRDQ9UH36 339 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 PNMA2Q9UL42 364 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 PALM3A6NDB9 673 aaPredicted RBP15.45■□□□□ 0.06
CKAP2-202ENST00000378034 FGD1P98174 961 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 CAP1Q01518 475 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 PLS1Q14651 629 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 COL13A1Q5TAT6 717 aaPredicted RBP15.45■□□□□ 0.06
CKAP2-202ENST00000378034 SYNE3Q6ZMZ3 975 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 PORCNQ9H237 461 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 GPHNQ9NQX3 736 aaPredicted RBP15.45■□□□□ 0.06
CKAP2-202ENST00000378034 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 ZSWIM8A7E2V4 1837 aa15.45■□□□□ 0.06
CKAP2-202ENST00000378034 PLEKHH3Q7Z736 793 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
CKAP2-202ENST00000378034 CWC22Q9HCG8 908 aaKnown RBP15.44■□□□□ 0.06
CKAP2-202ENST00000378034 MAD2L2Q9UI95 211 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 PTPN22Q9Y2R2 807 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 STRNO43815 780 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 GOLGA8HP0CJ92 632 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 KIF5BP33176 963 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 SLC16A2P36021 539 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 RCAN1P53805 252 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
CKAP2-202ENST00000378034 GPR142Q7Z601 462 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
CKAP2-202ENST00000378034 AGXT2Q9BYV1 514 aa15.44■□□□□ 0.06
CKAP2-202ENST00000378034 KLRF2D3W0D1 207 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 CPA1P15085 419 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 ERCC3P19447 782 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 GNAQP50148 359 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 TKFCQ3LXA3 575 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 SNRNP48Q6IEG0 339 aaKnown RBP15.43■□□□□ 0.06
CKAP2-202ENST00000378034 Q6ZUG5 572 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 SOCS4Q8WXH5 440 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 TCEANC2Q96MN5 208 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 IVNS1ABPQ9Y6Y0 642 aa15.43■□□□□ 0.06
CKAP2-202ENST00000378034 SLC15A5A6NIM6 579 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 SMARCA1P28370 1054 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 NCAPG2Q86XI2 1143 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 ABRAQ8N0Z2 381 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 CPXCR1Q8N123 301 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 STAG2Q8N3U4 1231 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 NUP133Q8WUM0 1156 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 NUDT12Q9BQG2 462 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
CKAP2-202ENST00000378034 RAVER2Q9HCJ3 691 aaKnown RBP15.42■□□□□ 0.06
CKAP2-202ENST00000378034 FBXO40Q9UH90 709 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 ZNF536O15090 1300 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 ICAM1P05362 532 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 PTPREP23469 700 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 IRF5Q13568 498 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms