RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 DPF3Q92784 378 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 FLRT1Q9NZU1 646 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 ADAMTS5Q9UNA0 930 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 COL11A1P12107 1806 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 TNRC18O15417 2968 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 PCP11498 1178 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 CYP2C19P33261 490 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 COPB2P35606 906 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 KCTD2Q14681 263 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 PRPF38BQ5VTL8 546 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 RASGRP2Q7LDG7 609 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 REPS2Q8NFH8 660 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 ESR2Q92731 530 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 ZKSCAN3Q9BRR0 538 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 DSCC1Q9BVC3 393 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 CTNNA3Q9UI47 895 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 RAD50Q92878 1312 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 COBLO75128 1261 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 PGK2P07205 417 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 HOXC6P09630 235 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 FGRP09769 529 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 MAP3K21Q5TCX8 1036 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 FAM160B2Q86V87 743 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 CHURC1Q8WUH1 139 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 GMCL1Q96IK5 515 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 HTATIP2Q9BUP3 242 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 IL25Q9H293 177 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
SMARCE1-203ENST00000377808 FRMPD2Q68DX3 1309 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 B4E1Z4 1266 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 KDM4AO75164 1064 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 CHMLP26374 656 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 SNAP25P60880 206 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 CCDC174Q6PII3 467 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 CENPQQ7L2Z9 268 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 SKAP1Q86WV1 359 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 ABRAQ8N0Z2 381 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 DIS3LQ8TF46 1054 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 TMEM47Q9BQJ4 181 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 SLC38A10Q9HBR0 1119 aa13.63□□□□□ -0.23
SMARCE1-203ENST00000377808 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 ZNF236Q9UL36 1845 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 NEFLP07196 543 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 RCSD1Q6JBY9 416 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 DDX11Q96FC9 970 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 PAWRQ96IZ0 340 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 RIPK3Q9Y572 518 aa13.62□□□□□ -0.23
SMARCE1-203ENST00000377808 PDE4DIPQ5VU43 2346 aa13.61□□□□□ -0.23
SMARCE1-203ENST00000377808 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-203ENST00000377808 SLC16A2P36021 539 aa13.61□□□□□ -0.23
SMARCE1-203ENST00000377808 OLFML2BQ68BL8 750 aa13.61□□□□□ -0.23
SMARCE1-203ENST00000377808 NECAB2Q7Z6G3 386 aa13.61□□□□□ -0.23
SMARCE1-203ENST00000377808 ANKRD35Q8N283 1001 aa13.61□□□□□ -0.23
SMARCE1-203ENST00000377808 MAML3Q96JK9 1138 aa13.61□□□□□ -0.23
SMARCE1-203ENST00000377808 FDX1P10109 184 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 ALAS1P13196 640 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 CAPN2P17655 700 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 OAZ1P54368 228 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 PRAMEF19Q5SWL8 479 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 ANO1Q5XXA6 986 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 AGBL1Q96MI9 1066 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 UBAC1Q9BSL1 405 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 KRT23Q9C075 422 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 C11orf49Q9H6J7 331 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 KAT14Q9H8E8 782 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 DDX20Q9UHI6 824 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 PRR12Q9ULL5 1215 aa13.6□□□□□ -0.23
SMARCE1-203ENST00000377808 ATP2A1O14983 1001 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 CYBAP13498 195 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 NOVP48745 357 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 PTH1RQ03431 593 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 TRDNQ13061 729 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 CCDC178Q5BJE1 867 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 SYDE2Q5VT97 1194 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 UBE2Q1Q7Z7E8 422 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 TRPV1Q8NER1 839 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 CHST13Q8NET6 341 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 TTC14Q96N46 770 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 ZSCAN10Q96SZ4 725 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 ACAD9Q9H845 621 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 RNF146Q9NTX7 359 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 CCPG1Q9ULG6 757 aa13.59□□□□□ -0.23
SMARCE1-203ENST00000377808 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms