RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 PRPHP41219 470 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 USP5P45974 858 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 GRAPQ13588 217 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 WWC2Q6AWC2 1192 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 CERS3Q8IU89 383 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 GPR161Q8N6U8 529 aaKnown RBP13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 CCDC148Q8NFR7 591 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 NELFBQ8WX92 580 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 GPKOWQ92917 476 aaPredicted RBP eCLIP13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 ARGLU1Q9NWB6 273 aaPredicted RBP13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 STXBP3O00186 592 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 ATP8B1O43520 1251 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 PRCPP42785 496 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 PPP2R3AQ06190 1150 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 TRIM14Q14142 442 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 ADSSL1Q8N142 457 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 CCDC24Q8N4L8 307 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 MKNK2Q9HBH9 465 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 KBTBD4Q9NVX7 518 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 JAG2Q9Y219 1238 aa13.27□□□□□ -0.29
TNFRSF9-201ENST00000377507 SBF2Q86WG5 1849 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 CCDC194A0A1B0GVG4 234 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 KCNJ18B7U540 433 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 N4BP3O15049 544 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 LDHCP07864 332 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 TSPY3P0CV98 308 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 TSPY8P0CW00 308 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 RASA1P20936 1047 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 STAT6P42226 847 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 FAM193AP78312 1265 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 KCNJ12Q14500 433 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 KARSQ15046 597 aaKnown RBP13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 GRIK5Q16478 980 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 IRF2BP1Q8IU81 584 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 ZNF444Q8N0Y2 327 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 CPLX3Q8WVH0 158 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 TMEM47Q9BQJ4 181 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 ZMYND12Q9H0C1 365 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 TMEM60Q9H2L4 133 aa13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 BAZ2BQ9UIF8 2168 aaKnown RBP13.26□□□□□ -0.29
TNFRSF9-201ENST00000377507 KLRC4O43908 158 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 PNMA6AP0CW24 399 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 CDC25AP30304 524 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 NOVP48745 357 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 TUBB2AQ13885 445 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 TERF2Q15554 542 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 ANKRD20A12PQ8NF67 263 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 RASGRP4Q8TDF6 673 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 RABGGTAQ92696 567 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 TUBB2BQ9BVA1 445 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 SPZ1Q9BXG8 430 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 RTFDC1Q9BY42 306 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 IRX2Q9BZI1 471 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 ABHD10Q9NUJ1 306 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 ANKIB1Q9P2G1 1089 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 CCNL1Q9UK58 526 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 TTF2Q9UNY4 1162 aaKnown RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 BTAF1O14981 1849 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 RNF225M0QZC1 329 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 RHOBTB3O94955 611 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 CCT6AP40227 531 aaKnown RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 DIXDC1Q155Q3 683 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 TMCO3Q6UWJ1 677 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 ZNF804AQ7Z570 1209 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 GIMAP8Q8ND71 665 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 AK8Q96MA6 479 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 CUEDC2Q9H467 287 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 ZNF287Q9HBT7 754 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 GDAQ9Y2T3 454 aa13.25□□□□□ -0.29
TNFRSF9-201ENST00000377507 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 GPR75-ASB3A0A0A6YYF3 556 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 A0A1W2PQC6 194 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 KIF5CO60282 957 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 EEF1GP26641 437 aaKnown RBP13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 ERVK-24P63145 666 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 NFIXQ14938 502 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 VPS16Q9H269 839 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 MAGEF1Q9HAY2 307 aa13.24□□□□□ -0.29
TNFRSF9-201ENST00000377507 A0A0U1RQJ8 604 aa13.23□□□□□ -0.29
TNFRSF9-201ENST00000377507 COBLO75128 1261 aa13.23□□□□□ -0.29
TNFRSF9-201ENST00000377507 UBA7P41226 1012 aa13.23□□□□□ -0.29
TNFRSF9-201ENST00000377507 PLA2G4AP47712 749 aa13.23□□□□□ -0.29
TNFRSF9-201ENST00000377507 INF2Q27J81 1249 aa13.23□□□□□ -0.29
TNFRSF9-201ENST00000377507 SLC4A8Q2Y0W8 1093 aa13.23□□□□□ -0.29
TNFRSF9-201ENST00000377507 CYP26C1Q6V0L0 522 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms