RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SPECC1	Q5M775	1068 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	LINC00301	Q8NCQ3	95 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	AGBL3	Q8NEM8	1001 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	RASGRP4	Q8TDF6	673 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	EEF2	P13639	858 aa	Known RBP	13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	TNNI2	P48788	182 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	NT5C2	P49902	561 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	MICALL2	Q8IY33	904 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	SPICE1	Q8N0Z3	855 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	RNF217	Q8TC41	542 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	PIGS	Q96S52	555 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	TSPYL1	Q9H0U9	437 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	CEP83	Q9Y592	693 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	ENTPD3	O75355	529 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	HNRNPH2	P55795	449 aa	Known RBP	13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	GABPA	Q06546	454 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	ZNF174	Q15697	407 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	PKN1	Q16512	942 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	SH3BP5L	Q7L8J4	393 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	MRPS27	Q92552	414 aa	Known RBP	13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	CNOT7	Q9UIV1	285 aa	Known RBP	13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	TIAM2	Q8IVF5	1701 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	FAM205C	A6NFA0	338 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499		H7C1D1	291 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	PFKFB3	Q16875	520 aa	Predicted RBP	13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	RILPL1	Q5EBL4	403 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	FOXP1	Q9H334	677 aa	Predicted RBP	13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	YY1AP1	Q9H869	796 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	KANSL2	Q9H9L4	492 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	DDX19A	Q9NUU7	478 aa	Known RBP	13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	TRIM75P	A6NK02	468 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	CALML3	P27482	149 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	E2F4	Q16254	413 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	LZTS2	Q9BRK4	669 aa		13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
LMO7-204	ENST00000377499	WNT10B	O00744	389 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	YEATS4	O95619	227 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	PTGER2	P43116	358 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	TERF2	Q15554	542 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	SLFN13	Q68D06	897 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC148	Q8NFR7	591 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	RASSF8	Q8NHQ8	419 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	CLIC6	Q96NY7	704 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	FEZ1	Q99689	392 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	VPS33B	Q9H267	617 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	POLR3E	Q9NVU0	708 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	CEP131	Q9UPN4	1083 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	SCN9A	Q15858	1988 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	ZNF445	P59923	1031 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	GABPB1	Q06547	395 aa	Predicted RBP	13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	TTBK2	Q6IQ55	1244 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	PDHB	P11177	359 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	MCM7	P33993	719 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	RAD51AP2	Q09MP3	1159 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	FUT2	Q10981	343 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	PDILT	Q8N807	584 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	FAM151A	Q8WW52	585 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	ERCC4	Q92889	916 aa	Predicted RBP	13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	PRIMPOL	Q96LW4	560 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	TTC12	Q9H892	705 aa	Predicted RBP	13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	EFCC1	Q9HA90	598 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	ST7	Q9NRC1	585 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	PCDHB6	Q9Y5E3	794 aa		13.29	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC192	P0DO97	292 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	RASA3	Q14644	834 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	TMEM179	Q6ZVK1	233 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	ANKS1A	Q92625	1134 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	COA7	Q96BR5	231 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	NUP88	Q99567	741 aa	Predicted RBP	13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	RASSF4	Q9H2L5	321 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	DNAJC18	Q9H819	358 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	NAV1	Q8NEY1	1877 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	MYH1	P12882	1939 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	TRIM66	O15016	1216 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	SLC39A14	Q15043	492 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	CDAN1	Q8IWY9	1227 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	BLID	Q8IZY5	108 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	EHD4	Q9H223	541 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	SNED1	Q8TER0	1413 aa		13.28	□□□□□ -0.28
LMO7-204	ENST00000377499	PALM3	A6NDB9	673 aa	Predicted RBP	13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	SMCO2	A6NFE2	343 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	RIOK3	O14730	519 aa	Known RBP	13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	PRKG1	Q13976	671 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	ASPRV1	Q53RT3	343 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	WWC2	Q6AWC2	1192 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	ADAL	Q6DHV7	355 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	PHF20	Q9BVI0	1012 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	C6orf50	Q9HD87	102 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	LTBP1	Q14766	1721 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	CYTH3	O43739	400 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC172	P0C7W6	258 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	SPDYE2	Q495Y8	402 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	PRAMEF18	Q5VWM3	479 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	JAKMIP3	Q5VZ66	844 aa		13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC84	Q86UT8	332 aa	Predicted RBP	13.27	□□□□□ -0.28
LMO7-204	ENST00000377499	MARCH6	O60337	910 aa		13.27	□□□□□ -0.29
LMO7-204	ENST00000377499	EGFR	P00533	1210 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms