RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 STAG2Q8N3U4 1231 aa22.29■■□□□ 1.16
SPSB1-203ENST00000377399 RPAP3Q9H6T3 665 aaPredicted RBP22.29■■□□□ 1.16
SPSB1-203ENST00000377399 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.29■■□□□ 1.16
SPSB1-203ENST00000377399 TMEM232C9JQI7 657 aa22.28■■□□□ 1.16
SPSB1-203ENST00000377399 STAT2P52630 851 aa22.28■■□□□ 1.16
SPSB1-203ENST00000377399 FAM160B2Q86V87 743 aa22.28■■□□□ 1.16
SPSB1-203ENST00000377399 CHURC1Q8WUH1 139 aa22.28■■□□□ 1.16
SPSB1-203ENST00000377399 LLPHQ9BRT6 129 aaKnown RBP22.28■■□□□ 1.16
SPSB1-203ENST00000377399 FAM217BQ9NTX9 383 aaPredicted RBP22.28■■□□□ 1.16
SPSB1-203ENST00000377399 CCL15-CCL14A0A0B4J2E2 113 aa22.27■■□□□ 1.16
SPSB1-203ENST00000377399 AKAP17AQ02040 695 aaKnown RBP22.27■■□□□ 1.16
SPSB1-203ENST00000377399 ST3GAL1Q11201 340 aa22.27■■□□□ 1.16
SPSB1-203ENST00000377399 PABPC4Q13310 644 aaKnown RBP eCLIP22.27■■□□□ 1.16
SPSB1-203ENST00000377399 CCL15Q16663 113 aa22.27■■□□□ 1.16
SPSB1-203ENST00000377399 TRIM22Q8IYM9 498 aa22.27■■□□□ 1.16
SPSB1-203ENST00000377399 FEM1BQ9UK73 627 aa22.27■■□□□ 1.16
SPSB1-203ENST00000377399 USP17L15C9J2P7 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L13C9JLJ4 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L11C9JVI0 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L18D6R9N7 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L22D6RA61 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L17D6RBQ6 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L19D6RCP7 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L20D6RJB6 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 IFNAR1P17181 557 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 USP17L24Q0WX57 530 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 TTBK2Q6IQ55 1244 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 SAMD1Q6SPF0 538 aaPredicted RBP22.26■■□□□ 1.15
SPSB1-203ENST00000377399 CMTR1Q8N1G2 835 aaKnown RBP22.26■■□□□ 1.15
SPSB1-203ENST00000377399 CCDC82Q8N4S0 544 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 INTS4Q96HW7 963 aaKnown RBP22.26■■□□□ 1.15
SPSB1-203ENST00000377399 SPZ1Q9BXG8 430 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 UBA5Q9GZZ9 404 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 AGTPBP1Q9UPW5 1226 aa22.26■■□□□ 1.15
SPSB1-203ENST00000377399 PTPDC1A2A3K4 754 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 MANSC4A6NHS7 340 aaPredicted RBP22.25■■□□□ 1.15
SPSB1-203ENST00000377399 FLOT1O75955 427 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SMARCA1P28370 1054 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SLC16A2P36021 539 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 HMGN5P82970 282 aaKnown RBP22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SSRP1Q08945 709 aaKnown RBP22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SYDE2Q5VT97 1194 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SRBD1Q8N5C6 995 aaKnown RBP22.25■■□□□ 1.15
SPSB1-203ENST00000377399 NSUN7Q8NE18 718 aaKnown RBP22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SLF1Q9BQI6 1058 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SLC26A6Q9BXS9 759 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 RBM27Q9P2N5 1060 aaKnown RBP22.25■■□□□ 1.15
SPSB1-203ENST00000377399 SMC3Q9UQE7 1217 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 CNTNAP5Q8WYK1 1306 aa22.25■■□□□ 1.15
SPSB1-203ENST00000377399 PLA2G6O60733 806 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 IRX3P78415 501 aaPredicted RBP22.24■■□□□ 1.15
SPSB1-203ENST00000377399 NTRK3Q16288 839 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 TREML2Q5T2D2 321 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 BTNL9Q6UXG8 535 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 PHKBQ93100 1093 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 MS4A4AQ96JQ5 239 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 CPVLQ9H3G5 476 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 FOXD4L1Q9NU39 408 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 SEC63Q9UGP8 760 aaKnown RBP22.24■■□□□ 1.15
SPSB1-203ENST00000377399 KIF3AQ9Y496 699 aa22.24■■□□□ 1.15
SPSB1-203ENST00000377399 SPRYD3Q8NCJ5 442 aa22.23■■□□□ 1.15
SPSB1-203ENST00000377399 KIFC2Q96AC6 838 aa22.23■■□□□ 1.15
SPSB1-203ENST00000377399 RRP36Q96EU6 259 aaKnown RBP22.23■■□□□ 1.15
SPSB1-203ENST00000377399 RNF26Q9BY78 433 aaPredicted RBP22.23■■□□□ 1.15
SPSB1-203ENST00000377399 VAT1LQ9HCJ6 419 aa22.23■■□□□ 1.15
SPSB1-203ENST00000377399 CTDP1Q9Y5B0 961 aaPredicted RBP22.23■■□□□ 1.15
SPSB1-203ENST00000377399 STK36Q9NRP7 1315 aa22.23■■□□□ 1.15
SPSB1-203ENST00000377399 JAK2O60674 1132 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 PPFIA3O75145 1194 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 FMNL1O95466 1100 aaPredicted RBP22.22■■□□□ 1.15
SPSB1-203ENST00000377399 CTDNEP1O95476 244 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 OSBPP22059 807 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 SLC4A3P48751 1232 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 SREBF2Q12772 1141 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 CATSPERGQ6ZRH7 1159 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 CTU1Q7Z7A3 348 aaKnown RBP22.22■■□□□ 1.15
SPSB1-203ENST00000377399 NBPF11Q86T75 865 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 HOMER1Q86YM7 354 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 ADGRF4Q8IZF3 695 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 FAM184AQ8NB25 1140 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 PIBF1Q8WXW3 757 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 BRI3BPQ8WY22 251 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 DDX11Q96FC9 970 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 IPO9Q96P70 1041 aaKnown RBP22.22■■□□□ 1.15
SPSB1-203ENST00000377399 RIOX1Q9H6W3 641 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 FBXO28Q9NVF7 368 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 ORC3Q9UBD5 711 aaPredicted RBP22.22■■□□□ 1.15
SPSB1-203ENST00000377399 PNMA3Q9UL41 463 aa22.22■■□□□ 1.15
SPSB1-203ENST00000377399 MYH6P13533 1939 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 HOXA7P31268 230 aaPredicted RBP22.21■■□□□ 1.15
SPSB1-203ENST00000377399 FUT2Q10981 343 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 MOGSQ13724 837 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 ANKRD23Q86SG2 305 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 PRPF38AQ8NAV1 312 aaKnown RBP22.21■■□□□ 1.15
SPSB1-203ENST00000377399 SMARCC2Q8TAQ2 1214 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 WASF1Q92558 559 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 PPP1R9AQ9ULJ8 1098 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 PRR12Q9ULL5 1215 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 MYPNQ86TC9 1320 aa22.21■■□□□ 1.15
SPSB1-203ENST00000377399 PRPF3O43395 683 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms