RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
FXN-201ENST00000377270 ARAP2Q8WZ64 1704 aa17.37■□□□□ 0.37
FXN-201ENST00000377270 PES1O00541 588 aaKnown RBP17.36■□□□□ 0.37
FXN-201ENST00000377270 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
FXN-201ENST00000377270 KCNQ4P56696 695 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 BEND6Q5SZJ8 279 aaPredicted RBP17.36■□□□□ 0.37
FXN-201ENST00000377270 FAM177A1Q8N128 213 aaPredicted RBP17.36■□□□□ 0.37
FXN-201ENST00000377270 ARL10Q8N8L6 244 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 MIGA1Q8NAN2 632 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 AFAP1L1Q8TED9 768 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
FXN-201ENST00000377270 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 CENPHQ9H3R5 247 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 POLR3EQ9NVU0 708 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 TACC3Q9Y6A5 838 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
FXN-201ENST00000377270 SPTLC2O15270 562 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 CAPN15O75808 1086 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 FSBPO95073 299 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 EZRP15311 586 aaKnown RBP17.36■□□□□ 0.37
FXN-201ENST00000377270 NAT1P18440 290 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 ERFEQ4G0M1 354 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 MFSD6Q6ZSS7 791 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 KCNG4Q8TDN1 519 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 NACAP1Q9BZK3 213 aa17.36■□□□□ 0.37
FXN-201ENST00000377270 YEATS4O95619 227 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 GNG11P61952 73 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 MYBPC2Q14324 1141 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
FXN-201ENST00000377270 FMR1NBQ8N0W7 255 aaPredicted RBP17.35■□□□□ 0.37
FXN-201ENST00000377270 STK11IPQ8N1F8 1099 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 MAB21L3Q8N8X9 362 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 TCP11Q8WWU5 503 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 WDR24Q96S15 920 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 PPP2R2CQ9Y2T4 447 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 A0A1W2PQ27 194 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 A0A1W2PQ64 194 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 ZEB2O60315 1214 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 GNAT2P19087 354 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 NDUFA8P51970 172 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 PIP4K2BP78356 416 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 FANCCQ00597 558 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 FILIP1LQ4L180 1135 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 SGMS1Q86VZ5 419 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 NUP133Q8WUM0 1156 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 EPAS1Q99814 870 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 KIAA1468Q9P260 1216 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
FXN-201ENST00000377270 GOLGA6L9A6NEM1 432 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
FXN-201ENST00000377270 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
FXN-201ENST00000377270 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
FXN-201ENST00000377270 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 KRT23Q9C075 422 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 CNNM2Q9H8M5 875 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 SUGCTQ9HAC7 445 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 ATP6V0A4Q9HBG4 840 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 ABCF2Q9UG63 623 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 SLC12A7Q9Y666 1083 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 WTIPA6NIX2 430 aaPredicted RBP17.34■□□□□ 0.37
FXN-201ENST00000377270 SPDYE3A6NKU9 549 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 CYP7A1P22680 504 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 GYG1P46976 350 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 KRT40Q6A162 431 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 C4AP0C0L4 1744 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 C4BP0C0L5 1744 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 LIFRP42702 1097 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 MAGEA10P43363 369 aaPredicted RBP17.34■□□□□ 0.37
FXN-201ENST00000377270 NCAPHQ15003 741 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 FAM217BQ9NTX9 383 aaPredicted RBP17.34■□□□□ 0.37
FXN-201ENST00000377270 SUN2Q9UH99 717 aa17.34■□□□□ 0.37
FXN-201ENST00000377270 RREB1Q92766 1687 aa17.33■□□□□ 0.37
FXN-201ENST00000377270 ARHGAP6O43182 974 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 NTRK3Q16288 839 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 SMIM5Q71RC9 77 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 KIFC2Q96AC6 838 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 ZKSCAN3Q9BRR0 538 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 USP5P45974 858 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 VPS37DQ86XT2 251 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 RGL1Q9NZL6 768 aa17.33■□□□□ 0.36
FXN-201ENST00000377270 DOCK2Q92608 1830 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 RANBP6O60518 1105 aaKnown RBP17.32■□□□□ 0.36
FXN-201ENST00000377270 CCDC15Q0P6D6 951 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 DBN1Q16643 649 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 CAPRIN2Q6IMN6 1127 aaKnown RBP17.32■□□□□ 0.36
FXN-201ENST00000377270 FAM81AQ8TBF8 368 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 DHX58Q96C10 678 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 IQCGQ9H095 443 aaKnown RBP17.32■□□□□ 0.36
FXN-201ENST00000377270 RNF40O75150 1001 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 PDHBP11177 359 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 TRIM29Q14134 588 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms