RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 JAG1P78504 1218 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
TRIM40-206ENST00000376724 UVSSAQ2YD98 709 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 PPP4R3BQ5MIZ7 849 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 FAM151AQ8WW52 585 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 TMEM39BQ9GZU3 492 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 CSRNP2Q9H175 543 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 KCNH3Q9ULD8 1083 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 HPSEQ9Y251 543 aa14.78□□□□□ -0.04
TRIM40-206ENST00000376724 SRPRBQ9Y5M8 271 aaKnown RBP14.78□□□□□ -0.04
TRIM40-206ENST00000376724 WNT10BO00744 389 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 TNIP1Q15025 636 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 METTL16Q86W50 562 aaKnown RBP14.77□□□□□ -0.04
TRIM40-206ENST00000376724 CDAN1Q8IWY9 1227 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 ADGRF4Q8IZF3 695 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 FAM200AQ8TCP9 573 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 CCDC12Q8WUD4 166 aaPredicted RBP14.77□□□□□ -0.04
TRIM40-206ENST00000376724 TRIM44Q96DX7 344 aaPredicted RBP14.77□□□□□ -0.04
TRIM40-206ENST00000376724 PPP1R9BQ96SB3 815 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 MYOZ2Q9NPC6 264 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 FAM13BQ9NYF5 915 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 NYAP2Q9P242 653 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 USP25Q9UHP3 1055 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 MYH4Q9Y623 1939 aa14.77□□□□□ -0.04
TRIM40-206ENST00000376724 GREB1LQ9C091 1923 aaPredicted RBP14.77□□□□□ -0.05
TRIM40-206ENST00000376724 CNTNAP1P78357 1384 aa14.77□□□□□ -0.05
TRIM40-206ENST00000376724 PTGDRQ13258 359 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 GALNT17Q6IS24 598 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 LUZP1Q86V48 1076 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 SIAH1Q8IUQ4 282 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 COA7Q96BR5 231 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 GJA3Q9Y6H8 435 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 M0R2N6 131 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 SLC1A4P43007 532 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 INF2Q27J81 1249 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
TRIM40-206ENST00000376724 SLFN13Q68D06 897 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 MIGA2Q7L4E1 593 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 MTMR14Q8NCE2 650 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 DAGLBQ8NCG7 672 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 MKL1Q969V6 931 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 ZMYND12Q9H0C1 365 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 CBX8Q9HC52 389 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 C6orf50Q9HD87 102 aa14.76□□□□□ -0.05
TRIM40-206ENST00000376724 HERC5Q9UII4 1024 aaKnown RBP14.76□□□□□ -0.05
TRIM40-206ENST00000376724 USP17L10C9JJH3 530 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 BMP15O95972 392 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 TRAPPC10P48553 1259 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 STX1AQ16623 288 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 LONRF3Q496Y0 759 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 USP49Q70CQ1 688 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 PDILTQ8N807 584 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 KIAA1468Q9P260 1216 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 COL2A1P02458 1487 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-206ENST00000376724 FAM237AA0A1B0GTK4 181 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 VWA3AA6NCI4 1184 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 BIN1O00499 593 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 POLR2DO15514 142 aaKnown RBP14.75□□□□□ -0.05
TRIM40-206ENST00000376724 EGFRP00533 1210 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 GNA11P29992 359 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 ZNF165P49910 485 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 PRELPP51888 382 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 ZRSR1Q15695 479 aaKnown RBP14.75□□□□□ -0.05
TRIM40-206ENST00000376724 C11orf57Q6ZUT1 292 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-206ENST00000376724 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
TRIM40-206ENST00000376724 CNNM3Q8NE01 707 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 TIGD1Q96MW7 591 aa14.75□□□□□ -0.05
TRIM40-206ENST00000376724 BIN2Q9UBW5 565 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-206ENST00000376724 UTRNP46939 3433 aa14.74□□□□□ -0.05
TRIM40-206ENST00000376724 F5H6K3 240 aa14.74□□□□□ -0.05
TRIM40-206ENST00000376724 ATP2C1P98194 919 aaPredicted RBP14.74□□□□□ -0.05
TRIM40-206ENST00000376724 KLRC3Q07444 240 aa14.74□□□□□ -0.05
TRIM40-206ENST00000376724 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
TRIM40-206ENST00000376724 NUP88Q99567 741 aaPredicted RBP14.74□□□□□ -0.05
TRIM40-206ENST00000376724 PNMA6FA0A0J9YX94 578 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 GMPSP49915 693 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-206ENST00000376724 PNOCQ13519 176 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 JAKMIP3Q5VZ66 844 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 ISM2Q6H9L7 571 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 KRBA2Q6ZNG9 492 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 DCAF4Q8WV16 495 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 FERMT2Q96AC1 680 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 ZBED3Q96IU2 234 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-206ENST00000376724 ANO10Q9NW15 660 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 PPP1R11O60927 126 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-206ENST00000376724 IKQ13123 557 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-206ENST00000376724 FKBP1CQ5VVH2 108 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 SAMD7Q7Z3H4 446 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 PDLIM2Q96JY6 352 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 TMEM260Q9NX78 707 aa14.73□□□□□ -0.05
TRIM40-206ENST00000376724 A0A1W2PRG0 241 aa14.72□□□□□ -0.05
TRIM40-206ENST00000376724 hCG_1984214I3L0E3 225 aa14.72□□□□□ -0.05
TRIM40-206ENST00000376724 ZBTB5O15062 677 aa14.72□□□□□ -0.05
TRIM40-206ENST00000376724 ADCY5O95622 1261 aa14.72□□□□□ -0.05
TRIM40-206ENST00000376724 NDUFB10O96000 172 aa14.72□□□□□ -0.05
TRIM40-206ENST00000376724 ECE1P42892 770 aa14.72□□□□□ -0.05
TRIM40-206ENST00000376724 TBC1D10BQ4KMP7 808 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-206ENST00000376724 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms