RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
VPS13A-204ENST00000376634 FNBP4Q8N3X1 1017 aaPredicted RBP13.66□□□□□ -0.22
VPS13A-204ENST00000376634 NUP160Q12769 1436 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 APOEP02649 317 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 ARMT1Q9H993 441 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 LRWD1Q9UFC0 647 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 TNNC2P02585 160 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 MMS19Q96T76 1030 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 CPXCR1Q8N123 301 aa13.66□□□□□ -0.22
VPS13A-204ENST00000376634 EIF3CLB5ME19 914 aaKnown RBP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 CAPN7Q9Y6W3 813 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 CITO14578 2027 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 EVI5O60447 810 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 FBXO31Q5XUX0 539 aaPredicted RBP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 KCNJ18B7U540 433 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 KCNJ12Q14500 433 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 SNCBQ16143 134 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 SF3A3Q12874 501 aaKnown RBP eCLIP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 NONOQ15233 471 aaKnown RBP eCLIP13.65□□□□□ -0.226e-6■■■■□ 21
VPS13A-204ENST00000376634 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 A6NJR5 290 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 ATF2P15336 505 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 GPBP1Q86WP2 473 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 PHKBQ93100 1093 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 SMYD2Q9NRG4 433 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 C8orf58Q8NAV2 365 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 KDRP35968 1356 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 HNRNPCL2B2RXH8 293 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 HNRNPCL1O60812 293 aaKnown RBP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 HIBADHP31937 336 aaKnown RBP13.65□□□□□ -0.22
VPS13A-204ENST00000376634 NIM1KQ8IY84 436 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 KIF9Q9HAQ2 790 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 RTEL1Q9NZ71 1219 aa13.65□□□□□ -0.22
VPS13A-204ENST00000376634 PASKQ96RG2 1323 aa13.65□□□□□ -0.23
VPS13A-204ENST00000376634 ABCB4P21439 1286 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 U2AF1L4Q8WU68 220 aaKnown RBP13.64□□□□□ -0.23
VPS13A-204ENST00000376634 KCNK3O14649 394 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 CFBP00751 764 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 SCHIP1Q9P0W5 487 aaPredicted RBP13.64□□□□□ -0.23
VPS13A-204ENST00000376634 ZNF518AQ6AHZ1 1483 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 MROH5Q6ZUA9 1318 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
VPS13A-204ENST00000376634 PDE6AP16499 860 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 CDKL2Q92772 493 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 PPWD1Q96BP3 646 aaKnown RBP13.64□□□□□ -0.23
VPS13A-204ENST00000376634 IRAK4Q9NWZ3 460 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 MAGEA1P43355 309 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 LIG4P49917 911 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 GOLGA8KD6RF30 607 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 HADHQ16836 314 aaKnown RBP13.64□□□□□ -0.23
VPS13A-204ENST00000376634 ADPGKQ9BRR6 497 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 CARD6Q9BX69 1037 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 PEX19P40855 299 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 LRMPQ12912 555 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 RUNDC3BQ96NL0 473 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 FAM193BQ96PV7 902 aaPredicted RBP13.64□□□□□ -0.23
VPS13A-204ENST00000376634 TCP10Q12799 353 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
VPS13A-204ENST00000376634 K7ENM7 598 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 ATICP31939 592 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 TRIM37O94972 964 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 MORC3Q14149 939 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 RNF169Q8NCN4 708 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 PARD3BQ8TEW8 1205 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 UIMC1Q96RL1 719 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 C14orf93Q9H972 538 aaKnown RBP13.63□□□□□ -0.23
VPS13A-204ENST00000376634 XPAP23025 273 aaPredicted RBP13.63□□□□□ -0.23
VPS13A-204ENST00000376634 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
VPS13A-204ENST00000376634 NSMFQ6X4W1 530 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 H0YIN7 160 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 POLR2BP30876 1174 aaKnown RBP13.63□□□□□ -0.23
VPS13A-204ENST00000376634 ZNF449Q6P9G9 518 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 DYMQ7RTS9 669 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 CCDC51Q96ER9 411 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 NRBF2Q96F24 287 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 SYF2O95926 243 aaKnown RBP13.63□□□□□ -0.23
VPS13A-204ENST00000376634 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
VPS13A-204ENST00000376634 ANKRD20A4Q4UJ75 823 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 ANKRD20A8PQ5CZ79 823 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 ANKRD20A2Q5SQ80 823 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 ANKRD20A1Q5TYW2 823 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
VPS13A-204ENST00000376634 CBX8Q9HC52 389 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms