RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 FMR1Q06787 632 aaKnown RBP eCLIP13.92□□□□□ -0.183e-7■■■□□ 15.5
DDR1-224ENST00000376567 KCNJ12Q14500 433 aa13.92□□□□□ -0.18
DDR1-224ENST00000376567 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
DDR1-224ENST00000376567 PRPF3O43395 683 aaKnown RBP13.92□□□□□ -0.18
DDR1-224ENST00000376567 RAD17O75943 681 aa13.92□□□□□ -0.18
DDR1-224ENST00000376567 MRPL12P52815 198 aaKnown RBP13.92□□□□□ -0.18
DDR1-224ENST00000376567 RBL2Q08999 1139 aa13.92□□□□□ -0.18
DDR1-224ENST00000376567 ACRBPQ8NEB7 543 aa13.92□□□□□ -0.18
DDR1-224ENST00000376567 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
DDR1-224ENST00000376567 CCDC94Q9BW85 323 aaPredicted RBP13.92□□□□□ -0.18
DDR1-224ENST00000376567 CTAGE9A4FU28 777 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 DDAH1O94760 285 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 SLFN14P0C7P3 912 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 ATP2B4P23634 1241 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 PPP2R3AQ06190 1150 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 MTF1Q14872 753 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 IMPACTQ9P2X3 320 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 H0YIN7 160 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
DDR1-224ENST00000376567 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
DDR1-224ENST00000376567 ETF1P62495 437 aaKnown RBP13.91□□□□□ -0.18
DDR1-224ENST00000376567 PRR16Q569H4 304 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 EARS2Q5JPH6 523 aaKnown RBP13.91□□□□□ -0.18
DDR1-224ENST00000376567 KIFC2Q96AC6 838 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 NFAT5O94916 1531 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 MEIS1O00470 390 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 ERLIN1O75477 346 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 RAPGEF1Q13905 1077 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 PPP2R5BQ15173 497 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 C2CD5Q86YS7 1000 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 LARGE2Q8N3Y3 721 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 LEMD3Q9Y2U8 911 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 THRAP3Q9Y2W1 955 aaKnown RBP13.91□□□□□ -0.18
DDR1-224ENST00000376567 GJA3Q9Y6H8 435 aa13.91□□□□□ -0.18
DDR1-224ENST00000376567 B4DLN1 442 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 FGFR2P21802 821 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 ALX1Q15699 326 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 ARMCX5Q6P1M9 558 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 NEK8Q86SG6 692 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 OR52Z1P0C646 297 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 MRPS25P82663 173 aaKnown RBP13.9□□□□□ -0.18
DDR1-224ENST00000376567 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 MIGA2Q7L4E1 593 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 KRT25Q7Z3Z0 450 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 CNGA4Q8IV77 575 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 BRIP1Q9BX63 1249 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 POTEMA6NI47 508 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 USO1O60763 962 aaKnown RBP13.9□□□□□ -0.18
DDR1-224ENST00000376567 SYCP1Q15431 976 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 PSTPIP2Q9H939 334 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 SERPINB13Q9UIV8 391 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
DDR1-224ENST00000376567 TERF1P54274 439 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 PYM1Q9BRP8 204 aaKnown RBP13.89□□□□□ -0.19
DDR1-224ENST00000376567 RABEP2Q9H5N1 569 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 ARFGAP3Q9NP61 516 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 PCDHA4Q9UN74 947 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 CTAGE15A4D2H0 777 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L15C9J2P7 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L13C9JLJ4 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L11C9JVI0 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L18D6R9N7 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L22D6RA61 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L17D6RBQ6 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L19D6RCP7 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L20D6RJB6 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 CTAGE8P0CG41 777 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 PLCG1P19174 1290 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L24Q0WX57 530 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 DNAJC21Q5F1R6 531 aaKnown RBP13.89□□□□□ -0.19
DDR1-224ENST00000376567 PRR5LQ6MZQ0 368 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 USP17L6PQ6QN14 398 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 CTAGE6Q86UF2 777 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 CTAGE4Q8IX94 777 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 ERO1AQ96HE7 468 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 AKAP12Q02952 1782 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
DDR1-224ENST00000376567 GRIK5Q16478 980 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 CERKLQ49MI3 558 aaPredicted RBP13.89□□□□□ -0.19
DDR1-224ENST00000376567 KRT27Q7Z3Y8 459 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 KRT222Q8N1A0 295 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 VGLL2Q8N8G2 317 aa13.89□□□□□ -0.19
DDR1-224ENST00000376567 FBXO2Q9UK22 296 aaPredicted RBP13.89□□□□□ -0.19
DDR1-224ENST00000376567 TCRBV5S4A2TA0A5A2 114 aa13.88□□□□□ -0.19
DDR1-224ENST00000376567 SEC31AO94979 1220 aaKnown RBP13.88□□□□□ -0.19
DDR1-224ENST00000376567 HOXA13P31271 388 aaPredicted RBP13.88□□□□□ -0.19
DDR1-224ENST00000376567 CYLC1P35663 651 aaPredicted RBP13.88□□□□□ -0.19
DDR1-224ENST00000376567 TOB1P50616 345 aaPredicted RBP13.88□□□□□ -0.19
DDR1-224ENST00000376567 KIF5AQ12840 1032 aa13.88□□□□□ -0.19
DDR1-224ENST00000376567 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
DDR1-224ENST00000376567 TBC1D22AQ8WUA7 517 aa13.88□□□□□ -0.19
DDR1-224ENST00000376567 PCDHA12Q9UN75 941 aa13.88□□□□□ -0.19
DDR1-224ENST00000376567 LMAN1P49257 510 aa13.88□□□□□ -0.19
DDR1-224ENST00000376567 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms