RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ERC2O15083 957 aa27.68■■■□□ 2.02
C9orf47-202ENST00000375850 FDX1P10109 184 aa27.68■■■□□ 2.02
C9orf47-202ENST00000375850 MAMDC4Q6UXC1 1216 aa27.68■■■□□ 2.02
C9orf47-202ENST00000375850 FERMT2Q96AC1 680 aa27.68■■■□□ 2.02
C9orf47-202ENST00000375850 CLIP2Q9UDT6 1046 aa27.68■■■□□ 2.02
C9orf47-202ENST00000375850 FBXO40Q9UH90 709 aa27.68■■■□□ 2.02
C9orf47-202ENST00000375850 PATL2C9JE40 543 aaKnown RBP27.67■■■□□ 2.02
C9orf47-202ENST00000375850 APPP05067 770 aa27.67■■■□□ 2.02
C9orf47-202ENST00000375850 SLC3A2P08195 630 aaKnown RBP27.67■■■□□ 2.02
C9orf47-202ENST00000375850 OAZ1P54368 228 aa27.67■■■□□ 2.02
C9orf47-202ENST00000375850 ZNF697Q5TEC3 545 aa27.67■■■□□ 2.02
C9orf47-202ENST00000375850 NUP88Q99567 741 aaPredicted RBP27.67■■■□□ 2.02
C9orf47-202ENST00000375850 EPB41L4AQ9HCS5 686 aaPredicted RBP27.67■■■□□ 2.02
C9orf47-202ENST00000375850 FEM1BQ9UK73 627 aa27.67■■■□□ 2.02
C9orf47-202ENST00000375850 FAM184BQ9ULE4 1060 aa27.67■■■□□ 2.02
C9orf47-202ENST00000375850 DNAJC25-GNG10A0A024R161 153 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 TTLL1O95922 423 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 TLE2Q04725 743 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 PDE4BQ07343 736 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 PPP4R3BQ5MIZ7 849 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 GMCL1P1Q8NEA9 526 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 BADQ92934 168 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 MTMR4Q9NYA4 1195 aa27.66■■■□□ 2.02
C9orf47-202ENST00000375850 PGK1P00558 417 aa27.65■■■□□ 2.02
C9orf47-202ENST00000375850 CLTBP09497 229 aa27.65■■■□□ 2.02
C9orf47-202ENST00000375850 CHST13Q8NET6 341 aa27.65■■■□□ 2.02
C9orf47-202ENST00000375850 NUP133Q8WUM0 1156 aa27.65■■■□□ 2.02
C9orf47-202ENST00000375850 SLC38A10Q9HBR0 1119 aa27.65■■■□□ 2.02
C9orf47-202ENST00000375850 LTBP2Q14767 1821 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 PLIN4Q96Q06 1357 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 A0A1W2PQ45 241 aaPredicted RBP27.64■■■□□ 2.02
C9orf47-202ENST00000375850 A0A1W2PQY0 241 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 MOXD2PA6NHM9 499 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 ADAMTS4O75173 837 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 TAL1P17542 331 aaPredicted RBP27.64■■■□□ 2.02
C9orf47-202ENST00000375850 SHHQ15465 462 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 IFNL3Q8IZI9 196 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 STK11IPQ8N1F8 1099 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 CEP95Q96GE4 821 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 TOX2Q96NM4 488 aa27.64■■■□□ 2.02
C9orf47-202ENST00000375850 COL11A1P12107 1806 aaPredicted RBP27.64■■■□□ 2.01
C9orf47-202ENST00000375850 TRIM43BA6NCK2 446 aa27.63■■■□□ 2.01
C9orf47-202ENST00000375850 SMAD3P84022 425 aaKnown RBP27.63■■■□□ 2.01
C9orf47-202ENST00000375850 CPXCR1Q8N123 301 aa27.63■■■□□ 2.01
C9orf47-202ENST00000375850 NEDD1Q8NHV4 660 aa27.63■■■□□ 2.01
C9orf47-202ENST00000375850 KIFC2Q96AC6 838 aa27.63■■■□□ 2.01
C9orf47-202ENST00000375850 TRIM43Q96BQ3 446 aaPredicted RBP27.63■■■□□ 2.01
C9orf47-202ENST00000375850 RIPK3Q9Y572 518 aa27.63■■■□□ 2.01
C9orf47-202ENST00000375850 M0R2C6 588 aa27.62■■■□□ 2.01
C9orf47-202ENST00000375850 KIAA0355O15063 1070 aa27.62■■■□□ 2.01
C9orf47-202ENST00000375850 DUSP11O75319 330 aaKnown RBP27.62■■■□□ 2.01
C9orf47-202ENST00000375850 TSPY3P0CV98 308 aa27.62■■■□□ 2.01
C9orf47-202ENST00000375850 TSPY8P0CW00 308 aa27.62■■■□□ 2.01
C9orf47-202ENST00000375850 ZNFX1Q9P2E3 1918 aaKnown RBP27.62■■■□□ 2.01
C9orf47-202ENST00000375850 SNAI1O95863 264 aaPredicted RBP27.61■■■□□ 2.01
C9orf47-202ENST00000375850 TSHZ3Q63HK5 1081 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 ANKRD33Q7Z3H0 272 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 SH3RF1Q7Z6J0 888 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 ANKRD35Q8N283 1001 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 GUCD1Q96NT3 240 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 NAPBQ9H115 298 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 ABHD16BQ9H3Z7 469 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 SPC25Q9HBM1 224 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 STARD7Q9NQZ5 370 aa27.61■■■□□ 2.01
C9orf47-202ENST00000375850 DCDC2CA8MYV0 355 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 PRDM1O75626 825 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 BMP3P12645 472 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 RAG1P15918 1043 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 CST5P28325 142 aaPredicted RBP27.6■■■□□ 2.01
C9orf47-202ENST00000375850 ACLYP53396 1101 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 C9orf50Q5SZB4 431 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 KLHDC9Q8NEP7 349 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 RAVER2Q9HCJ3 691 aaKnown RBP27.6■■■□□ 2.01
C9orf47-202ENST00000375850 ZHX1Q9UKY1 873 aaPredicted RBP27.6■■■□□ 2.01
C9orf47-202ENST00000375850 SYNRGQ9UMZ2 1314 aa27.6■■■□□ 2.01
C9orf47-202ENST00000375850 ACVR2BQ13705 512 aa27.59■■■□□ 2.01
C9orf47-202ENST00000375850 SLFN13Q68D06 897 aa27.59■■■□□ 2.01
C9orf47-202ENST00000375850 FAM160B2Q86V87 743 aa27.59■■■□□ 2.01
C9orf47-202ENST00000375850 PCSK9Q8NBP7 692 aaKnown RBP27.59■■■□□ 2.01
C9orf47-202ENST00000375850 FSD1Q9BTV5 496 aa27.59■■■□□ 2.01
C9orf47-202ENST00000375850 MROH7Q68CQ1 1323 aa27.59■■■□□ 2.01
C9orf47-202ENST00000375850 PLXNA1Q9UIW2 1896 aa27.59■■■□□ 2.01
C9orf47-202ENST00000375850 PQBP1O60828 265 aaKnown RBP27.58■■■□□ 2.01
C9orf47-202ENST00000375850 PI4K2BQ8TCG2 481 aa27.58■■■□□ 2.01
C9orf47-202ENST00000375850 CHURC1Q8WUH1 139 aa27.58■■■□□ 2.01
C9orf47-202ENST00000375850 GMCL1Q96IK5 515 aa27.58■■■□□ 2.01
C9orf47-202ENST00000375850 TMEM39AQ9NV64 488 aa27.58■■■□□ 2.01
C9orf47-202ENST00000375850 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.58■■■□□ 2.01
C9orf47-202ENST00000375850 ELP1O95163 1332 aa27.58■■■□□ 2.01
C9orf47-202ENST00000375850 TMEM265A0A087WTH1 108 aa27.57■■■□□ 2
C9orf47-202ENST00000375850 SLC4A3P48751 1232 aa27.57■■■□□ 2
C9orf47-202ENST00000375850 STAT2P52630 851 aa27.57■■■□□ 2
C9orf47-202ENST00000375850 PPARAQ07869 468 aa27.57■■■□□ 2
C9orf47-202ENST00000375850 ZMYM1Q5SVZ6 1142 aa27.57■■■□□ 2
C9orf47-202ENST00000375850 CCSAPQ6IQ19 270 aaPredicted RBP27.57■■■□□ 2
C9orf47-202ENST00000375850 LRRC47Q8N1G4 583 aaKnown RBP27.57■■■□□ 2
C9orf47-202ENST00000375850 GLT1D1Q96MS3 346 aa27.57■■■□□ 2
C9orf47-202ENST00000375850 PLA2G6O60733 806 aa27.56■■■□□ 2
C9orf47-202ENST00000375850 TFAP4Q01664 338 aa27.56■■■□□ 2
C9orf47-202ENST00000375850 FPGSQ05932 587 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms