RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 GPCPD1Q9NPB8 672 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 MAD2L2Q9UI95 211 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 BRPF3Q9ULD4 1205 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 RABGAP1Q9Y3P9 1069 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 PALM3A6NDB9 673 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-201ENST00000374673 VWA5AO00534 786 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 CNMDO75829 334 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 GOLGA8HP0CJ92 632 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 FDX1P10109 184 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 CTCFP49711 727 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-201ENST00000374673 EVCP57679 992 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 IKQ13123 557 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-201ENST00000374673 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 NUP133Q8WUM0 1156 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 KIFC2Q96AC6 838 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 TXNRD2Q9NNW7 524 aa17.52■□□□□ 0.4
HSPG2-201ENST00000374673 KLF18A0A0U1RQI7 1052 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 ERVK-9P63128 1117 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 ERVK-24P63145 666 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 SP3Q02447 781 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 APOBRQ0VD83 1088 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 SYDE2Q5VT97 1194 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 SAMD1Q6SPF0 538 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-201ENST00000374673 STAG2Q8N3U4 1231 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 REPS2Q8NFH8 660 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-201ENST00000374673 PAGR1Q9BTK6 254 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 BTBD7Q9P203 1132 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 NID2Q14112 1375 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 MYH6P13533 1939 aa17.51■□□□□ 0.39
HSPG2-201ENST00000374673 ZSWIM8A7E2V4 1837 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 ZBTB43O43298 467 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 FKTNO75072 461 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 KIF5BP33176 963 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 SLC16A2P36021 539 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 NEK4P51957 841 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 GPRC5AQ8NFJ5 357 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 ZNF296Q8WUU4 475 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-201ENST00000374673 SLC38A10Q9HBR0 1119 aa17.5■□□□□ 0.39
HSPG2-201ENST00000374673 ATP2A1O14983 1001 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 ZBED4O75132 1171 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 RXRAP19793 462 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 OAZ1P54368 228 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 TMEM132BQ14DG7 1078 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 RABEP1Q15276 862 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 ANKRD1Q15327 319 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 Q3C1V9 767 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 FANCBQ8NB91 859 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 IL27Q8NEV9 243 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 UBA5Q9GZZ9 404 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 RANBP17Q9H2T7 1088 aaKnown RBP17.49■□□□□ 0.39
HSPG2-201ENST00000374673 ZNF214Q9UL59 606 aaPredicted RBP17.49■□□□□ 0.39
HSPG2-201ENST00000374673 CASP8AP2Q9UKL3 1982 aa17.49■□□□□ 0.39
HSPG2-201ENST00000374673 PEX10O60683 326 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 SMARCA1P28370 1054 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 GNAQP50148 359 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 LBX1P52954 281 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 AK2P54819 239 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 CCNA1P78396 465 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 LACTBP83111 547 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-201ENST00000374673 PPP2R5BQ15173 497 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 RAB11FIP4Q86YS3 637 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-201ENST00000374673 ERO1AQ96HE7 468 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 SPATC1LQ9H0A9 340 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
HSPG2-201ENST00000374673 RBM28Q9NW13 759 aaKnown RBP17.48■□□□□ 0.39
HSPG2-201ENST00000374673 CTDP1Q9Y5B0 961 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-201ENST00000374673 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 METAP2P50579 478 aaKnown RBP eCLIP17.47■□□□□ 0.393e-9■■■■□ 23.8
HSPG2-201ENST00000374673 RTN1Q16799 776 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 LZTS2Q9BRK4 669 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 RIOX1Q9H6W3 641 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 HPS5Q9UPZ3 1129 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 PCNTO95613 3336 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 ZNF536O15090 1300 aa17.47■□□□□ 0.39
HSPG2-201ENST00000374673 PDIA3P30101 505 aaKnown RBP17.46■□□□□ 0.39
HSPG2-201ENST00000374673 STAT3P40763 770 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 KIF22Q14807 665 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 SLC35G1Q2M3R5 365 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 TMTC3Q6ZXV5 915 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 NBPF11Q86T75 865 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 RIOX2Q8IUF8 465 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 SHCBP1Q8NEM2 672 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 MTMR8Q96EF0 704 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 SPZ1Q9BXG8 430 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 MOV10L1Q9BXT6 1211 aaKnown RBP17.46■□□□□ 0.39
HSPG2-201ENST00000374673 TEX13BQ9BXU2 312 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 JMJD4Q9H9V9 463 aa17.46■□□□□ 0.39
HSPG2-201ENST00000374673 RAVER2Q9HCJ3 691 aaKnown RBP17.46■□□□□ 0.39
HSPG2-201ENST00000374673 FAM217BQ9NTX9 383 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-201ENST00000374673 NAP1L2Q9ULW6 460 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms