RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 IPO9Q96P70 1041 aaKnown RBP16.29■□□□□ 0.2
TCEA3-201ENST00000374601 RIOX1Q9H6W3 641 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 RASSF10A6NK89 507 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 CETPP11597 493 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 FDPSP14324 419 aaKnown RBP16.28■□□□□ 0.2
TCEA3-201ENST00000374601 CCL15Q16663 113 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 SYDE2Q5VT97 1194 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 CPLX2Q6PUV4 134 aaKnown RBP16.28■□□□□ 0.2
TCEA3-201ENST00000374601 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
TCEA3-201ENST00000374601 ADGRF4Q8IZF3 695 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 SPRYD3Q8NCJ5 442 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 MTMR8Q96EF0 704 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 JMJD4Q9H9V9 463 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 FEM1BQ9UK73 627 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 PRR12Q9ULL5 1215 aa16.28■□□□□ 0.2
TCEA3-201ENST00000374601 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
TCEA3-201ENST00000374601 MYH15Q9Y2K3 1946 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L15C9J2P7 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L11C9JVI0 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L18D6R9N7 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L22D6RA61 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L19D6RCP7 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L20D6RJB6 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 PRPF3O43395 683 aaKnown RBP16.27■□□□□ 0.2
TCEA3-201ENST00000374601 USP17L24Q0WX57 530 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 CATSPERGQ6ZRH7 1159 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 FAM160B2Q86V87 743 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 CCDC102AQ96A19 550 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 RNF26Q9BY78 433 aaPredicted RBP16.27■□□□□ 0.2
TCEA3-201ENST00000374601 PPP1R9AQ9ULJ8 1098 aa16.27■□□□□ 0.2
TCEA3-201ENST00000374601 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
TCEA3-201ENST00000374601 FLOT1O75955 427 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 HSP90AA1P07900 732 aaKnown RBP16.26■□□□□ 0.19
TCEA3-201ENST00000374601 GJB2P29033 226 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
TCEA3-201ENST00000374601 SSRP1Q08945 709 aaKnown RBP16.26■□□□□ 0.19
TCEA3-201ENST00000374601 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
TCEA3-201ENST00000374601 PKN1Q16512 942 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 CYP4F22Q6NT55 531 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 AIFM3Q96NN9 605 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 PIGSQ96S52 555 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 VAT1LQ9HCJ6 419 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 ORC3Q9UBD5 711 aaPredicted RBP16.26■□□□□ 0.19
TCEA3-201ENST00000374601 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
TCEA3-201ENST00000374601 V9GY48 417 aaPredicted RBP16.26■□□□□ 0.19
TCEA3-201ENST00000374601 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
TCEA3-201ENST00000374601 SNAP25P60880 206 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
TCEA3-201ENST00000374601 CDC37Q16543 378 aaPredicted RBP16.25■□□□□ 0.19
TCEA3-201ENST00000374601 ANKRD23Q86SG2 305 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 HOMER1Q86YM7 354 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 TRIM22Q8IYM9 498 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 KIFC2Q96AC6 838 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
TCEA3-201ENST00000374601 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 PTPN18Q99952 460 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 RANBP17Q9H2T7 1088 aaKnown RBP16.25■□□□□ 0.19
TCEA3-201ENST00000374601 ADAMTS5Q9UNA0 930 aa16.25■□□□□ 0.19
TCEA3-201ENST00000374601 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
TCEA3-201ENST00000374601 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
TCEA3-201ENST00000374601 DEXIO95424 95 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 DSG3P32926 999 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 HTRA3P83110 453 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 QRICH1Q2TAL8 776 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 DEFB115Q30KQ5 88 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 POTEEQ6S8J3 1075 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
TCEA3-201ENST00000374601 PAXIP1Q6ZW49 1069 aaPredicted RBP16.24■□□□□ 0.19
TCEA3-201ENST00000374601 FAM43AQ8N2R8 423 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 PRPF38AQ8NAV1 312 aaKnown RBP16.24■□□□□ 0.19
TCEA3-201ENST00000374601 SHISA4Q96DD7 197 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 ATG4CQ96DT6 458 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 CAPNS2Q96L46 248 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 ASCC2Q9H1I8 757 aaPredicted RBP16.24■□□□□ 0.19
TCEA3-201ENST00000374601 SLC45A1Q9Y2W3 748 aa16.24■□□□□ 0.19
TCEA3-201ENST00000374601 IGF2BP3O00425 579 aaKnown RBP eCLIP16.23■□□□□ 0.19
TCEA3-201ENST00000374601 ZBTB5O15062 677 aa16.23■□□□□ 0.19
TCEA3-201ENST00000374601 SCG2P13521 617 aa16.23■□□□□ 0.19
TCEA3-201ENST00000374601 COG2Q14746 738 aa16.23■□□□□ 0.19
TCEA3-201ENST00000374601 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
TCEA3-201ENST00000374601 REPS2Q8NFH8 660 aa16.23■□□□□ 0.19
TCEA3-201ENST00000374601 GPKOWQ92917 476 aaPredicted RBP eCLIP16.23■□□□□ 0.19
TCEA3-201ENST00000374601 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
TCEA3-201ENST00000374601 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
TCEA3-201ENST00000374601 LCTP09848 1927 aa16.23■□□□□ 0.19
TCEA3-201ENST00000374601 ZNF536O15090 1300 aa16.22■□□□□ 0.19
TCEA3-201ENST00000374601 PNMA6FA0A0J9YX94 578 aa16.22■□□□□ 0.19
TCEA3-201ENST00000374601 PDHXO00330 501 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms