RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 FLT1P17948 1338 aa26.97■■□□□ 1.91
CDK9-201ENST00000373264 URI1O94763 535 aaPredicted RBP26.96■■□□□ 1.91
CDK9-201ENST00000373264 CLEC10AQ8IUN9 316 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 CGNQ9P2M7 1197 aaKnown RBP26.96■■□□□ 1.91
CDK9-201ENST00000373264 DDX60LQ5H9U9 1706 aaKnown RBP26.96■■□□□ 1.91
CDK9-201ENST00000373264 STX10O60499 249 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 PBX1P40424 430 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 STAT6P42226 847 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 RHBDL3P58872 404 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 AMOTL1Q8IY63 956 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 BARHL2Q9NY43 387 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 GGA1Q9UJY5 639 aa26.96■■□□□ 1.91
CDK9-201ENST00000373264 TRIM49BA6NDI0 452 aa26.95■■□□□ 1.91
CDK9-201ENST00000373264 RNF225M0QZC1 329 aaPredicted RBP26.95■■□□□ 1.91
CDK9-201ENST00000373264 GTPBP6O43824 516 aaPredicted RBP26.95■■□□□ 1.91
CDK9-201ENST00000373264 CEP95Q96GE4 821 aa26.95■■□□□ 1.91
CDK9-201ENST00000373264 ZMYND15Q9H091 742 aa26.95■■□□□ 1.91
CDK9-201ENST00000373264 VPS16Q9H269 839 aa26.95■■□□□ 1.91
CDK9-201ENST00000373264 RPN1P04843 607 aaKnown RBP26.95■■□□□ 1.9
CDK9-201ENST00000373264 CRY2Q49AN0 593 aa26.95■■□□□ 1.9
CDK9-201ENST00000373264 RAD9BQ6WBX8 426 aa26.95■■□□□ 1.9
CDK9-201ENST00000373264 UBA5Q9GZZ9 404 aa26.95■■□□□ 1.9
CDK9-201ENST00000373264 SH3GLB2Q9NR46 395 aa26.95■■□□□ 1.9
CDK9-201ENST00000373264 GPR75-ASB3A0A0A6YYF3 556 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 AKR1B15C9JRZ8 316 aaPredicted RBP26.94■■□□□ 1.9
CDK9-201ENST00000373264 F8W031 263 aaPredicted RBP26.94■■□□□ 1.9
CDK9-201ENST00000373264 PRCPP42785 496 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 DDR1Q08345 913 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 KRT31Q15323 416 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 PARP3Q9Y6F1 533 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 LDHCP07864 332 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 CASP14P31944 242 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 FXR1P51114 621 aaKnown RBP eCLIP26.94■■□□□ 1.9
CDK9-201ENST00000373264 NELFBQ8WX92 580 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 EEF2KMTQ96G04 330 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 DISC1Q9NRI5 854 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 TCP11L1Q9NUJ3 509 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 TAB2Q9NYJ8 693 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 PHLPP2Q6ZVD8 1323 aa26.94■■□□□ 1.9
CDK9-201ENST00000373264 RIMBP2O15034 1052 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 SLURP2P0DP57 97 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 LONP1P36776 959 aaKnown RBP26.93■■□□□ 1.9
CDK9-201ENST00000373264 PMS1P54277 932 aaKnown RBP26.93■■□□□ 1.9
CDK9-201ENST00000373264 GNG11P61952 73 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 ARL6IP4Q66PJ3 421 aaKnown RBP26.93■■□□□ 1.9
CDK9-201ENST00000373264 C16orf86Q6ZW13 317 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 SEPT12Q8IYM1 358 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 RASSF8Q8NHQ8 419 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 TBC1D16Q8TBP0 767 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 C6orf229H3BNL8 230 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 ZSCAN12O43309 604 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 IL1R1P14778 569 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 PICALMQ13492 652 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 DTHD1Q6ZMT9 781 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 MXD3Q9BW11 206 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 EPC1Q9H2F5 836 aa26.93■■□□□ 1.9
CDK9-201ENST00000373264 GYPCP04921 128 aa26.92■■□□□ 1.9
CDK9-201ENST00000373264 EIF6P56537 245 aaKnown RBP26.92■■□□□ 1.9
CDK9-201ENST00000373264 CCP110O43303 1012 aa26.92■■□□□ 1.9
CDK9-201ENST00000373264 NAPAP54920 295 aa26.92■■□□□ 1.9
CDK9-201ENST00000373264 FCHSD1Q86WN1 690 aa26.92■■□□□ 1.9
CDK9-201ENST00000373264 FRMPD2Q68DX3 1309 aaPredicted RBP26.91■■□□□ 1.9
CDK9-201ENST00000373264 USP17L5A8MUK1 530 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 GNAQP50148 359 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 PAK1Q13153 545 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 LETM2Q2VYF4 491 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 C15orf52Q6ZUT6 534 aaKnown RBP26.91■■□□□ 1.9
CDK9-201ENST00000373264 CERKQ8TCT0 537 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 PIGSQ96S52 555 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 GTF2IP78347 998 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 ZNF658Q5TYW1 1059 aaPredicted RBP26.91■■□□□ 1.9
CDK9-201ENST00000373264 ZNF397Q8NF99 534 aaPredicted RBP26.91■■□□□ 1.9
CDK9-201ENST00000373264 CARD6Q9BX69 1037 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 LZTFL1Q9NQ48 299 aa26.91■■□□□ 1.9
CDK9-201ENST00000373264 MEX3CQ5U5Q3 659 aaKnown RBP26.9■■□□□ 1.9
CDK9-201ENST00000373264 PPFIBP1Q86W92 1011 aa26.9■■□□□ 1.9
CDK9-201ENST00000373264 ZNF446Q9NWS9 450 aa26.9■■□□□ 1.9
CDK9-201ENST00000373264 ATP2B4P23634 1241 aa26.9■■□□□ 1.9
CDK9-201ENST00000373264 ST5P78524 1137 aa26.9■■□□□ 1.9
CDK9-201ENST00000373264 TMED8Q6PL24 325 aaPredicted RBP26.9■■□□□ 1.9
CDK9-201ENST00000373264 TMEM260Q9NX78 707 aa26.9■■□□□ 1.9
CDK9-201ENST00000373264 RWDD2AQ9UIY3 292 aa26.9■■□□□ 1.9
CDK9-201ENST00000373264 N4BP3O15049 544 aa26.89■■□□□ 1.9
CDK9-201ENST00000373264 ABL1P00519 1130 aa26.89■■□□□ 1.9
CDK9-201ENST00000373264 PARP1P09874 1014 aaKnown RBP26.89■■□□□ 1.9
CDK9-201ENST00000373264 NEDD1Q8NHV4 660 aa26.89■■□□□ 1.9
CDK9-201ENST00000373264 MYH8P13535 1937 aa26.89■■□□□ 1.89
CDK9-201ENST00000373264 SMCO2A6NFE2 343 aa26.89■■□□□ 1.89
CDK9-201ENST00000373264 CCNT1O60563 726 aaKnown RBP26.89■■□□□ 1.89
CDK9-201ENST00000373264 CCDC148Q8NFR7 591 aa26.89■■□□□ 1.89
CDK9-201ENST00000373264 RBM17Q96I25 401 aaKnown RBP26.89■■□□□ 1.89
CDK9-201ENST00000373264 BIN2Q9UBW5 565 aaPredicted RBP26.89■■□□□ 1.89
CDK9-201ENST00000373264 IGSF3O75054 1194 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 MFAP3LO75121 409 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 TXLNAP40222 546 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 CT47A1Q5JQC4 288 aaPredicted RBP26.88■■□□□ 1.89
CDK9-201ENST00000373264 IRF2BP1Q8IU81 584 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 DAGLBQ8NCG7 672 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 DDX41Q9UJV9 622 aaKnown RBP26.88■■□□□ 1.89
CDK9-201ENST00000373264 DAGLAQ9Y4D2 1042 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms