RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 EPSTI1Q96J88 318 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 RIOK1Q9BRS2 568 aaKnown RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 CCDC94Q9BW85 323 aaPredicted RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 NAT10Q9H0A0 1025 aaKnown RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 TUBE1Q9UJT0 475 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 FBXO2Q9UK22 296 aaPredicted RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 SMTNL1A8MU46 457 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 PPP6R2O75170 966 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 CDKL5O76039 1030 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 PRDX5P30044 214 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 SEC23AQ15436 765 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 PTPN14Q15678 1187 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 PKN1Q16512 942 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 QPCTQ16769 361 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 TBC1D9BQ66K14 1250 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 ZNF787Q6DD87 383 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 GPR101Q96P66 508 aaPredicted RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 CSRNP2Q9H175 543 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 AATFQ9NY61 560 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHD6-202ENST00000373222 SCN7AQ01118 1682 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 MAGEB6P1A0A0J9YX57 407 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 USP17L8P0C7I0 530 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 UBASH3AP57075 661 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 FAM98CQ17RN3 349 aaKnown RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 CFAP100Q494V2 611 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 CPLX2Q6PUV4 134 aaKnown RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 SYT10Q6XYQ8 523 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 FAM43BQ6ZT52 329 aaPredicted RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 DDX12PQ92771 950 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 FAM84BQ96KN1 310 aaPredicted RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 PPP1R13BQ96KQ4 1090 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 OSBPL5Q9H0X9 879 aaPredicted RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 SAMSN1Q9NSI8 373 aaKnown RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 MINPP1Q9UNW1 487 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 V9GY48 417 aaPredicted RBP7.29□□□□□ -1.24
CHD6-202ENST00000373222 NRAPQ86VF7 1730 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 PNPLA7Q6ZV29 1317 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 DUOX1Q9NRD9 1551 aa7.29□□□□□ -1.24
CHD6-202ENST00000373222 A0A0U1RQJ8 604 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 USP17L12C9JPN9 530 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 USP17L21D6R901 530 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 SERPINC1P01008 464 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 CDC25AP30304 524 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 AFMP43652 599 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 STX17P56962 302 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 FOXD4Q12950 439 aaPredicted RBP7.28□□□□□ -1.24
CHD6-202ENST00000373222 ELOAQ14241 798 aaKnown RBP7.28□□□□□ -1.24
CHD6-202ENST00000373222 ELF2Q15723 593 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 JAZF1Q86VZ6 243 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 ATRIPQ8WXE1 791 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 UBAC1Q9BSL1 405 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 KRT23Q9C075 422 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.28□□□□□ -1.24
CHD6-202ENST00000373222 MAN1B1Q9UKM7 699 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 COL5A3P25940 1745 aaPredicted RBP7.28□□□□□ -1.24
CHD6-202ENST00000373222 CUTAO60888 179 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 SFPQP23246 707 aaKnown RBP eCLIP7.28□□□□□ -1.242e-6■■■□□ 15.2
CHD6-202ENST00000373222 ADKP55263 362 aaKnown RBP7.28□□□□□ -1.24
CHD6-202ENST00000373222 PIP4K2BP78356 416 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 MYL5Q02045 173 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 FUT2Q10981 343 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 NPY5RQ15761 445 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 GRIK5Q16478 980 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 GLIPR1L2Q4G1C9 344 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 CTR9Q6PD62 1173 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 ZBTB9Q96C00 473 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 DHX58Q96C10 678 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 BPIFA3Q9BQP9 254 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 SLC4A5Q9BY07 1137 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 NACAP1Q9BZK3 213 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 CNNM2Q9H8M5 875 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 ZNF804BA4D1E1 1349 aa7.28□□□□□ -1.24
CHD6-202ENST00000373222 ERICH2A1L162 156 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 PTPREP23469 700 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 MECOMQ03112 1051 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 POSTNQ15063 836 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 ZNF174Q15697 407 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 KLHL10Q6JEL2 608 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 ANKRD18AQ8IVF6 992 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 TRIM22Q8IYM9 498 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 MAP7D2Q96T17 732 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 EPC1Q9H2F5 836 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 DMGDHQ9UI17 866 aaKnown RBP7.27□□□□□ -1.24
CHD6-202ENST00000373222 PNMA2Q9UL42 364 aa7.27□□□□□ -1.24
CHD6-202ENST00000373222 STK36Q9NRP7 1315 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 RREB1Q92766 1687 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 FAM237AA0A1B0GTK4 181 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 SCAMP3O14828 347 aaKnown RBP7.27□□□□□ -1.25
CHD6-202ENST00000373222 ACTN4O43707 911 aaKnown RBP7.27□□□□□ -1.25
CHD6-202ENST00000373222 GFRA3O60609 400 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 DEXIO95424 95 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 GTF2E1P29083 439 aaPredicted RBP7.27□□□□□ -1.25
CHD6-202ENST00000373222 PSEN2P49810 448 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 TROAPQ12815 778 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 DPYDQ12882 1025 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 MRPL58Q14197 206 aaKnown RBP7.27□□□□□ -1.25
CHD6-202ENST00000373222 MTF1Q14872 753 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 SART3Q15020 963 aaKnown RBP7.27□□□□□ -1.25
CHD6-202ENST00000373222 KMT5BQ4FZB7 885 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms