RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 ABCB11O95342 1321 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 LDHCP07864 332 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 MYH1P12882 1939 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
LCN2-202ENST00000372998 COL5A3P25940 1745 aaPredicted RBP12.24□□□□□ -0.45
LCN2-202ENST00000372998 KRT9P35527 623 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 UBA7P41226 1012 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 FOXR2Q6PJQ5 311 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 GRAMD1CQ8IYS0 662 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 SDR42E1Q8WUS8 393 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 MED15Q96RN5 788 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 INCENPQ9NQS7 918 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 SEC31BQ9NQW1 1179 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 DISC1Q9NRI5 854 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 CAPN11Q9UMQ6 739 aa12.24□□□□□ -0.45
LCN2-202ENST00000372998 XDHP47989 1333 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 A0A1W2PQJ5 194 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 TSPY2A6NKD2 308 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 A6NNZ2 444 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 RHOBTB3O94955 611 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 NDUFA10O95299 355 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 ADAMTS2O95450 1211 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 STX17P56962 302 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 UBXN1Q04323 297 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 TUBB8Q3ZCM7 444 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 FKBP15Q5T1M5 1219 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 USP49Q70CQ1 688 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 KRT25Q7Z3Z0 450 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 ADSSL1Q8N142 457 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 SLC35F6Q8N357 371 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 LRRN4CLQ8ND94 238 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 RASSF8Q8NHQ8 419 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 CPLX3Q8WVH0 158 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
LCN2-202ENST00000372998 DNAJC7Q99615 494 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 DESI2Q9BSY9 194 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 MKRN1Q9UHC7 482 aaKnown RBP12.23□□□□□ -0.45
LCN2-202ENST00000372998 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
LCN2-202ENST00000372998 ROBO1Q9Y6N7 1651 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 ROBO3Q96MS0 1386 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 A0A087X0B3 334 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 LOC102724428A0A0B4J2F2 783 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 USP17L12C9JPN9 530 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 USP17L21D6R901 530 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 SLC26A4O43511 780 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 USO1O60763 962 aaKnown RBP12.22□□□□□ -0.45
LCN2-202ENST00000372998 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 CLSTN1O94985 981 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 PLEKHA8P1O95397 391 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 BAG3O95817 575 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 PARP1P09874 1014 aaKnown RBP12.22□□□□□ -0.45
LCN2-202ENST00000372998 GNA11P29992 359 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 SIK1P57059 783 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 ITIH3Q06033 890 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 SLC20A2Q08357 652 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 GOLGA8FQ08AF8 430 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 GOLGA8DPQ0D2H9 430 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 GRM4Q14833 912 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 HSP90AA4PQ58FG1 418 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 NOM1Q5C9Z4 860 aaKnown RBP12.22□□□□□ -0.45
LCN2-202ENST00000372998 BEND6Q5SZJ8 279 aaPredicted RBP12.22□□□□□ -0.45
LCN2-202ENST00000372998 PIK3AP1Q6ZUJ8 805 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 SRBD1Q8N5C6 995 aaKnown RBP12.22□□□□□ -0.45
LCN2-202ENST00000372998 CCDC155Q8N6L0 562 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
LCN2-202ENST00000372998 EDEM3Q9BZQ6 932 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 EXOC1Q9NV70 894 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 L1RE1Q9UN81 338 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 STRCQ7RTU9 1775 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 AHDC1Q5TGY3 1603 aaPredicted RBP12.22□□□□□ -0.45
LCN2-202ENST00000372998 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
LCN2-202ENST00000372998 SLIT2O94813 1529 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 EIF3CLB5ME19 914 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 POLR3GO15318 223 aaPredicted RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 SEC31AO94979 1220 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 HIBADHP31937 336 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 MCM7P33993 719 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 CCT6AP40227 531 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 FXR1P51114 621 aaKnown RBP eCLIP12.21□□□□□ -0.45
LCN2-202ENST00000372998 ZBED6P86452 979 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 NPY5RQ15761 445 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 DDB1Q16531 1140 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 MEA1Q16626 185 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 KIAA1328Q86T90 577 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 FNBP4Q8N3X1 1017 aaPredicted RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 WDR66Q8TBY9 1149 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 NSUN4Q96CB9 384 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 FAM84BQ96KN1 310 aaPredicted RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 TRIM47Q96LD4 638 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 EIF3CQ99613 913 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 RAB34Q9BZG1 259 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 FAM107BQ9H098 131 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 NUCKS1Q9H1E3 243 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms