RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TRIM56Q9BRZ2 755 aaKnown RBP12.67□□□□□ -0.38
VCL-202ENST00000372755 KCNK3O14649 394 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 IFNB1P01574 187 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 NXNQ6DKJ4 435 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
VCL-202ENST00000372755 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 USP19O94966 1318 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 POLR2MP0CAP2 368 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 SETSIPP0DME0 302 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 ZNF274Q96GC6 653 aaPredicted RBP12.67□□□□□ -0.38
VCL-202ENST00000372755 ANO3Q9BYT9 981 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 IPO11Q9UI26 975 aaKnown RBP12.67□□□□□ -0.38
VCL-202ENST00000372755 ITSN2Q9NZM3 1697 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 POLR2BP30876 1174 aaKnown RBP12.66□□□□□ -0.38
VCL-202ENST00000372755 DIXDC1Q155Q3 683 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 MUM1Q2TAK8 710 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 GBP5Q96PP8 586 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 CCDC68Q9H2F9 335 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 METTL14Q9HCE5 456 aaKnown RBP12.66□□□□□ -0.38
VCL-202ENST00000372755 ARMCX3Q9UH62 379 aaPredicted RBP12.66□□□□□ -0.38
VCL-202ENST00000372755 SPDYE16A6NNV3 312 aaPredicted RBP12.66□□□□□ -0.38
VCL-202ENST00000372755 ABCB4P21439 1286 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 TSC1Q92574 1164 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 RUNDC3BQ96NL0 473 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 XPO4Q9C0E2 1151 aaKnown RBP12.66□□□□□ -0.38
VCL-202ENST00000372755 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
VCL-202ENST00000372755 K7ENM7 598 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 DBN1Q16643 649 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 TRIML1Q8N9V2 468 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 BAG5Q9UL15 447 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
VCL-202ENST00000372755 H7C1D1 291 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 STAMQ92783 540 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 SCYL1Q96KG9 808 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 PANK4Q9NVE7 773 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 ITKQ08881 620 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.382e-10■■□□□ 13.9
VCL-202ENST00000372755 UIMC1Q96RL1 719 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 TEKT3Q9BXF9 490 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 BAIAP2L1Q9UHR4 511 aa12.66□□□□□ -0.38
VCL-202ENST00000372755 CHL1O00533 1208 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 GSTA1P08263 222 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 GSTA2P09210 222 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 GUCY2FP51841 1108 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 EDC4Q6P2E9 1401 aaKnown RBP12.65□□□□□ -0.38
VCL-202ENST00000372755 NOSTRINQ8IVI9 506 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
VCL-202ENST00000372755 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 PFKFB1P16118 471 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 IL13P35225 146 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 XKR9Q5GH70 373 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 RINT1Q6NUQ1 792 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 JAK2O60674 1132 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 A1BGP04217 495 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 AOC3Q16853 763 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 KRT26Q7Z3Y9 468 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 STK38LQ9Y2H1 464 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 ESYT2A0FGR8 921 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 GADD45BO75293 160 aaPredicted RBP12.65□□□□□ -0.38
VCL-202ENST00000372755 ADKP55263 362 aaKnown RBP12.65□□□□□ -0.38
VCL-202ENST00000372755 PRR16Q569H4 304 aa12.65□□□□□ -0.38
VCL-202ENST00000372755 FAM193BQ96PV7 902 aaPredicted RBP12.65□□□□□ -0.38
VCL-202ENST00000372755 PPIP5K2O43314 1243 aa12.65□□□□□ -0.39
VCL-202ENST00000372755 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.39
VCL-202ENST00000372755 SDCCAG3Q96C92 435 aa12.65□□□□□ -0.39
VCL-202ENST00000372755 COL4A3BPQ9Y5P4 624 aa12.65□□□□□ -0.39
VCL-202ENST00000372755 KDRP35968 1356 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 THAP12O43422 761 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 OR52Z1P0C646 297 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 ATF2P15336 505 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 JADE1Q6IE81 842 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 CDKL2Q92772 493 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 GNGT1P63211 74 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 PRPSAP1Q14558 356 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 SEPT10Q9P0V9 454 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 PCDHA12Q9UN75 941 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 GOLGA8QA0A0J9YX86 632 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 GOLGA8OA6NCC3 632 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 GOLGA8NF8WBI6 632 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 S100BP04271 92 aaPredicted RBP12.64□□□□□ -0.39
VCL-202ENST00000372755 KIF22Q14807 665 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 NEK8Q86SG6 692 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 TBX22Q9Y458 520 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 ZMYM6O95789 1325 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 GTPBP6O43824 516 aaPredicted RBP12.64□□□□□ -0.39
VCL-202ENST00000372755 LMNB1P20700 586 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 TECP42680 631 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms