RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 AGPAT5Q9NUQ2 364 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ANKARQ7Z5J8 1434 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 DIP2BQ9P265 1576 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 BAZ2BQ9UIF8 2168 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 TNRQ92752 1358 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 HEG1Q9ULI3 1381 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 CYP2D7A0A087X1C5 515 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 TTC26A0AVF1 554 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PP2D1A8MPX8 630 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PATL2C9JE40 543 aaKnown RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 EYA2O00167 538 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 IFIT3O14879 490 aaKnown RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PPP6R2O75170 966 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PPFIA4O75335 1185 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 ERLIN1O75477 346 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 ERLIN2O94905 339 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 GPTP24298 496 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PBX1P40424 430 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PLCD1P51178 756 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 HDGFP51858 240 aaKnown RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 SEC24CP53992 1094 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 GNGT1P63211 74 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 ACTN3Q08043 901 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 TRIM29Q14134 588 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 TOM1L2Q6ZVM7 507 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 SND1Q7KZF4 910 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 ARHGEF25Q86VW2 580 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 DNAAF5Q86Y56 855 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 GOLGA6L1Q8N7Z2 621 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 CEP112Q8N8E3 955 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 MIGA1Q8NAN2 632 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 FAM71BQ8TC56 605 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 IGDCC4Q8TDY8 1250 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 COG1Q8WTW3 980 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 HNRNPLLQ8WVV9 542 aaKnown RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PAGE5Q96GU1 130 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 ARMT1Q9H993 441 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 SLC52A2Q9HAB3 445 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 GEMIN8Q9NWZ8 242 aaKnown RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 KIF13AQ9H1H9 1805 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 NEO1Q92859 1461 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 ATP2C2O75185 946 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 SCP2P22307 547 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 SPRED3Q2MJR0 410 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 RRAGBQ5VZM2 374 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 TMC4Q7Z404 712 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 CAGE1Q8TC20 777 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PPM1EQ8WY54 764 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 HPS3Q969F9 1004 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 LRRC1Q9BTT6 524 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 CENPHQ9H3R5 247 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 MLXIPQ9HAP2 919 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 PRDM16Q9HAZ2 1276 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 EPB41L4AQ9HCS5 686 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 JADE2Q9NQC1 790 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 CEP126Q9P2H0 1117 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 MTMR7Q9Y216 660 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 ZNF532Q9HCE3 1301 aa6.1□□□□□ -1.43
ATG4A-204ENST00000372246 N4BP2Q86UW6 1770 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-204ENST00000372246 GOLGA6CA6NDK9 693 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 MAFGO15525 162 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 GOLGA6DP0CG33 693 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 USP14P54578 494 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 GUCY1A3Q02108 690 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 UBXN1Q04323 297 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 TTMPQ5BVD1 217 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 CCDC122Q5T0U0 273 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 NUDT18Q6ZVK8 323 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 EGFL6Q8IUX8 553 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 JMYQ8N9B5 988 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 MLKLQ8NB16 471 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 MS4A14Q96JA4 679 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 PANX2Q96RD6 677 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 NCAPGQ9BPX3 1015 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 DEF6Q9H4E7 631 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 GOLGA6AQ9NYA3 693 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 PNMA3Q9UL41 463 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 SLC12A7Q9Y666 1083 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 CAPN7Q9Y6W3 813 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 GRIN2DO15399 1336 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 TOPAZ1Q8N9V7 1692 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 KDM6AO15550 1401 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-204ENST00000372246 GOLGA6L9A6NEM1 432 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 CYP27B1O15528 508 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 NDUFA10O95299 355 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 MMP1P03956 469 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 TUBB4AP04350 444 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 FAM153BP0C7A2 387 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 PHKA1P46020 1223 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 SSRP1Q08945 709 aaKnown RBP6.09□□□□□ -1.43
ATG4A-204ENST00000372246 FAM153CQ494X1 144 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 RBM26Q5T8P6 1007 aaKnown RBP6.09□□□□□ -1.43
ATG4A-204ENST00000372246 SPATA1Q5VX52 437 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 WDR59Q6PJI9 974 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 TTC5Q8N0Z6 440 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 CCDC148Q8NFR7 591 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 JAKMIP2Q96AA8 810 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 PLA2G2EQ9NZK7 142 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 FAM153AQ9UHL3 310 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 EPN1Q9Y6I3 576 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms