RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 USP17L20D6RJB6 530 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 CPLX1O14810 134 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 CYTH3O43739 400 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 HSPA6P17066 643 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 GNAQP50148 359 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 USP17L24Q0WX57 530 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 FUT2Q10981 343 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 CATSPERGQ6ZRH7 1159 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 FAM43AQ8N2R8 423 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 PHKBQ93100 1093 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 SLF1Q9BQI6 1058 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 FEM1BQ9UK73 627 aa15.2■□□□□ 0.02
TTC39A-204ENST00000371750 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
TTC39A-204ENST00000371750 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
TTC39A-204ENST00000371750 JAK2O60674 1132 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 KIF23Q02241 960 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-204ENST00000371750 CUL4AQ13619 759 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
TTC39A-204ENST00000371750 PRR12Q9ULL5 1215 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 PTPDC1A2A3K4 754 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 IFNAR1P17181 557 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-204ENST00000371750 SNAP25P60880 206 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 NOGQ13253 232 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 BECN1Q14457 450 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 ANKRD23Q86SG2 305 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 FAM160B2Q86V87 743 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 ADGRF4Q8IZF3 695 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 PIBF1Q8WXW3 757 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 LZTS2Q9BRK4 669 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 SPZ1Q9BXG8 430 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
TTC39A-204ENST00000371750 WDR33Q9C0J8 1336 aaKnown RBP15.18■□□□□ 0.02
TTC39A-204ENST00000371750 hCG_1642624A0A1W2PR95 340 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 PDHXO00330 501 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 PLA2G6O60733 806 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 VEGFBP49765 207 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-204ENST00000371750 HOMER1Q86YM7 354 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 ATG4CQ96DT6 458 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 SLC26A6Q9BXS9 759 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 ASCC2Q9H1I8 757 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-204ENST00000371750 RIOX1Q9H6W3 641 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 JMJD4Q9H9V9 463 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 VAT1LQ9HCJ6 419 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
TTC39A-204ENST00000371750 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
TTC39A-204ENST00000371750 SPDYE16A6NNV3 312 aaPredicted RBP15.17■□□□□ 0.02
TTC39A-204ENST00000371750 SREBF2Q12772 1141 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.02
TTC39A-204ENST00000371750 CPLX2Q6PUV4 134 aaKnown RBP15.17■□□□□ 0.02
TTC39A-204ENST00000371750 CHURC1Q8WUH1 139 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 PIGSQ96S52 555 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 CDKL5O76039 1030 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 CYP2C8P10632 490 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 DSG3P32926 999 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 SLC4A3P48751 1232 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 CDC37Q16543 378 aaPredicted RBP15.17■□□□□ 0.02
TTC39A-204ENST00000371750 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 SLC45A1Q9Y2W3 748 aa15.17■□□□□ 0.02
TTC39A-204ENST00000371750 MYPNQ86TC9 1320 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 FMNL1O95466 1100 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-204ENST00000371750 TAL1P17542 331 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-204ENST00000371750 OSBPP22059 807 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 PRPF38AQ8NAV1 312 aaKnown RBP15.16■□□□□ 0.02
TTC39A-204ENST00000371750 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 P2RX7Q99572 595 aaKnown RBP15.16■□□□□ 0.02
TTC39A-204ENST00000371750 LLPHQ9BRT6 129 aaKnown RBP15.16■□□□□ 0.02
TTC39A-204ENST00000371750 STK36Q9NRP7 1315 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 SMARCA1P28370 1054 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 HERVK_113P62684 666 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 COG2Q14746 738 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 POTEEQ6S8J3 1075 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 SPRYD3Q8NCJ5 442 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 MTMR8Q96EF0 704 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 RNF26Q9BY78 433 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-204ENST00000371750 RANBP17Q9H2T7 1088 aaKnown RBP15.16■□□□□ 0.02
TTC39A-204ENST00000371750 PNMA3Q9UL41 463 aa15.16■□□□□ 0.02
TTC39A-204ENST00000371750 VWA5AO00534 786 aa15.15■□□□□ 0.02
TTC39A-204ENST00000371750 FDPSP14324 419 aaKnown RBP15.15■□□□□ 0.02
TTC39A-204ENST00000371750 SSRP1Q08945 709 aaKnown RBP15.15■□□□□ 0.02
TTC39A-204ENST00000371750 QRICH1Q2TAL8 776 aa15.15■□□□□ 0.02
TTC39A-204ENST00000371750 CCDC174Q6PII3 467 aa15.15■□□□□ 0.02
TTC39A-204ENST00000371750 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
TTC39A-204ENST00000371750 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
TTC39A-204ENST00000371750 V9GY48 417 aaPredicted RBP15.15■□□□□ 0.02
TTC39A-204ENST00000371750 PRPF3O43395 683 aaKnown RBP15.14■□□□□ 0.01
TTC39A-204ENST00000371750 PEX10O60683 326 aa15.14■□□□□ 0.01
TTC39A-204ENST00000371750 PPP1R11O60927 126 aaPredicted RBP15.14■□□□□ 0.01
TTC39A-204ENST00000371750 TM4SF4P48230 202 aa15.14■□□□□ 0.01
TTC39A-204ENST00000371750 INHBEP58166 350 aa15.14■□□□□ 0.01
TTC39A-204ENST00000371750 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
TTC39A-204ENST00000371750 AIFM3Q96NN9 605 aa15.14■□□□□ 0.01
TTC39A-204ENST00000371750 PARK7Q99497 189 aaKnown RBP15.14■□□□□ 0.01
TTC39A-204ENST00000371750 SLC38A10Q9HBR0 1119 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms