RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 USP17L24Q0WX57 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 GPAT2Q6NUI2 795 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 CATSPERGQ6ZRH7 1159 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 CHURC1Q8WUH1 139 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 PKNOX2Q96KN3 472 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 FLOT1O75955 427 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 IFNAR1P17181 557 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 SLC4A3P48751 1232 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 BTNL9Q6UXG8 535 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 PHKBQ93100 1093 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 RLFQ13129 1914 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 MANSC4A6NHS7 340 aaPredicted RBP20.45■□□□□ 0.86
VPS37B-202ENST00000371248 CYTH3O43739 400 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 FUT2Q10981 343 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 SLC35G1Q2M3R5 365 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 FAM160B2Q86V87 743 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 ADGRF4Q8IZF3 695 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 KIFC2Q96AC6 838 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 CAPNS2Q96L46 248 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 FOXD4L1Q9NU39 408 aa20.45■□□□□ 0.86
VPS37B-202ENST00000371248 PLA2G6O60733 806 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 CDKL5O76039 1030 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 HSP90AA1P07900 732 aaKnown RBP20.44■□□□□ 0.86
VPS37B-202ENST00000371248 SMARCA1P28370 1054 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 HOXA7P31268 230 aaPredicted RBP20.44■□□□□ 0.86
VPS37B-202ENST00000371248 C1QTNF8P60827 252 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 SYDE2Q5VT97 1194 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 NSUN7Q8NE18 718 aaKnown RBP20.44■□□□□ 0.86
VPS37B-202ENST00000371248 PIBF1Q8WXW3 757 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 SLF1Q9BQI6 1058 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 SPZ1Q9BXG8 430 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 RIOX1Q9H6W3 641 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 TESPA1A2RU30 521 aaPredicted RBP20.44■□□□□ 0.86
VPS37B-202ENST00000371248 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 JAK2O60674 1132 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 COG2Q14746 738 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 PRPF38AQ8NAV1 312 aaKnown RBP20.44■□□□□ 0.86
VPS37B-202ENST00000371248 ZIC5Q96T25 663 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 PTPN18Q99952 460 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 LLPHQ9BRT6 129 aaKnown RBP20.44■□□□□ 0.86
VPS37B-202ENST00000371248 SLC26A6Q9BXS9 759 aa20.44■□□□□ 0.86
VPS37B-202ENST00000371248 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.44■□□□□ 0.86
VPS37B-202ENST00000371248 CNTNAP5Q8WYK1 1306 aa20.43■□□□□ 0.86
VPS37B-202ENST00000371248 SSRP1Q08945 709 aaKnown RBP20.43■□□□□ 0.86
VPS37B-202ENST00000371248 PABPC4Q13310 644 aaKnown RBP eCLIP20.43■□□□□ 0.86
VPS37B-202ENST00000371248 JMJD4Q9H9V9 463 aa20.43■□□□□ 0.86
VPS37B-202ENST00000371248 V9GY48 417 aaPredicted RBP20.43■□□□□ 0.86
VPS37B-202ENST00000371248 hCG_1642624A0A1W2PR95 340 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 PTPDC1A2A3K4 754 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 KIF23Q02241 960 aaPredicted RBP20.42■□□□□ 0.86
VPS37B-202ENST00000371248 ANKRD23Q86SG2 305 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 DDX11Q96FC9 970 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 PPP1R9AQ9ULJ8 1098 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 PDHXO00330 501 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 AOC2O75106 756 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 INHBEP58166 350 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 IRX3P78415 501 aaPredicted RBP20.42■□□□□ 0.86
VPS37B-202ENST00000371248 NOGQ13253 232 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 HOMER1Q86YM7 354 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 TRIM22Q8IYM9 498 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 INTS4Q96HW7 963 aaKnown RBP20.42■□□□□ 0.86
VPS37B-202ENST00000371248 PIGSQ96S52 555 aa20.42■□□□□ 0.86
VPS37B-202ENST00000371248 ASCC2Q9H1I8 757 aaPredicted RBP20.42■□□□□ 0.86
VPS37B-202ENST00000371248 FMNL1O95466 1100 aaPredicted RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 OSBPP22059 807 aa20.41■□□□□ 0.86
VPS37B-202ENST00000371248 DSG3P32926 999 aa20.41■□□□□ 0.86
VPS37B-202ENST00000371248 SNAP25P60880 206 aa20.41■□□□□ 0.86
VPS37B-202ENST00000371248 RRP36Q96EU6 259 aaKnown RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 RNF26Q9BY78 433 aaPredicted RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 HOXC10Q9NYD6 342 aa20.41■□□□□ 0.86
VPS37B-202ENST00000371248 DAXXQ9UER7 740 aaPredicted RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 COL11A1P12107 1806 aaPredicted RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 PRPF3O43395 683 aaKnown RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 HSPA6P17066 643 aa20.41■□□□□ 0.86
VPS37B-202ENST00000371248 AKAP17AQ02040 695 aaKnown RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 SREBF2Q12772 1141 aa20.41■□□□□ 0.86
VPS37B-202ENST00000371248 P2RX7Q99572 595 aaKnown RBP20.41■□□□□ 0.86
VPS37B-202ENST00000371248 SMC3Q9UQE7 1217 aa20.41■□□□□ 0.86
VPS37B-202ENST00000371248 WDR33Q9C0J8 1336 aaKnown RBP20.4■□□□□ 0.86
VPS37B-202ENST00000371248 ATG4CQ96DT6 458 aa20.4■□□□□ 0.86
VPS37B-202ENST00000371248 ORC3Q9UBD5 711 aaPredicted RBP20.4■□□□□ 0.86
VPS37B-202ENST00000371248 SLC45A1Q9Y2W3 748 aa20.4■□□□□ 0.86
VPS37B-202ENST00000371248 SPDYE16A6NNV3 312 aaPredicted RBP20.39■□□□□ 0.86
VPS37B-202ENST00000371248 IGF2BP3O00425 579 aaKnown RBP eCLIP20.39■□□□□ 0.86
VPS37B-202ENST00000371248 FDPSP14324 419 aaKnown RBP20.39■□□□□ 0.86
VPS37B-202ENST00000371248 VEGFBP49765 207 aa20.39■□□□□ 0.86
VPS37B-202ENST00000371248 PNMA3Q9UL41 463 aa20.39■□□□□ 0.86
VPS37B-202ENST00000371248 CYP2C8P10632 490 aa20.39■□□□□ 0.85
VPS37B-202ENST00000371248 GJB2P29033 226 aa20.39■□□□□ 0.85
VPS37B-202ENST00000371248 TM4SF4P48230 202 aa20.39■□□□□ 0.85
VPS37B-202ENST00000371248 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.85
VPS37B-202ENST00000371248 CDC37Q16543 378 aaPredicted RBP20.39■□□□□ 0.85
VPS37B-202ENST00000371248 IFNL1Q8IU54 200 aa20.39■□□□□ 0.85
VPS37B-202ENST00000371248 MTMR8Q96EF0 704 aa20.39■□□□□ 0.85
VPS37B-202ENST00000371248 SEC63Q9UGP8 760 aaKnown RBP20.39■□□□□ 0.85
VPS37B-202ENST00000371248 MYPNQ86TC9 1320 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms