RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
GPC4-201ENST00000370828 SYCE1Q8N0S2 351 aa13.98□□□□□ -0.17
GPC4-201ENST00000370828 ENOX1Q8TC92 643 aaKnown RBP13.98□□□□□ -0.17
GPC4-201ENST00000370828 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
GPC4-201ENST00000370828 NFU1Q9UMS0 254 aa13.98□□□□□ -0.17
GPC4-201ENST00000370828 GNPTABQ3T906 1256 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 GSDMBQ8TAX9 411 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 SREK1Q8WXA9 508 aaKnown RBP13.97□□□□□ -0.17
GPC4-201ENST00000370828 ABTB1Q969K4 478 aaPredicted RBP13.97□□□□□ -0.17
GPC4-201ENST00000370828 LSM14BQ9BX40 385 aaKnown RBP13.97□□□□□ -0.17
GPC4-201ENST00000370828 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 ATP8A1Q9Y2Q0 1164 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 KIAA0232Q92628 1395 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 CASQ2O14958 399 aaPredicted RBP13.97□□□□□ -0.17
GPC4-201ENST00000370828 GMNNO75496 209 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 ABCB4P21439 1286 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 CFAP61Q8NHU2 1237 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 IRX2Q9BZI1 471 aaPredicted RBP13.97□□□□□ -0.17
GPC4-201ENST00000370828 KLC4Q9NSK0 619 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 LRWD1Q9UFC0 647 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 RPL13P26373 211 aaKnown RBP13.97□□□□□ -0.17
GPC4-201ENST00000370828 PLA2G4AP47712 749 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 ADCY1Q08828 1119 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 FLT4P35916 1363 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 KDM5DQ9BY66 1539 aa13.97□□□□□ -0.17
GPC4-201ENST00000370828 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
GPC4-201ENST00000370828 MOCS3O95396 460 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 VPS41P49754 854 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 XAGE2Q96GT9 111 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 CCNT1O60563 726 aaKnown RBP13.96□□□□□ -0.17
GPC4-201ENST00000370828 FAM13AO94988 1023 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 GNA11P29992 359 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 DHX40Q8IX18 779 aaKnown RBP13.96□□□□□ -0.17
GPC4-201ENST00000370828 THEMISQ8N1K5 641 aaPredicted RBP13.96□□□□□ -0.17
GPC4-201ENST00000370828 NFATC2IPQ8NCF5 419 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 U2AF1L4Q8WU68 220 aaKnown RBP13.96□□□□□ -0.17
GPC4-201ENST00000370828 SYMPKQ92797 1274 aaKnown RBP13.96□□□□□ -0.17
GPC4-201ENST00000370828 EPB41P11171 864 aaKnown RBP13.96□□□□□ -0.17
GPC4-201ENST00000370828 AKNAD1Q5T1N1 836 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 CSRNP2Q9H175 543 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 KDM5BQ9UGL1 1544 aa13.96□□□□□ -0.17
GPC4-201ENST00000370828 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.18
GPC4-201ENST00000370828 ELF1P32519 619 aa13.96□□□□□ -0.18
GPC4-201ENST00000370828 CLUL1Q15846 466 aa13.96□□□□□ -0.18
GPC4-201ENST00000370828 CCDC13Q8IYE1 715 aa13.96□□□□□ -0.18
GPC4-201ENST00000370828 ATG3Q9NT62 314 aa13.96□□□□□ -0.18
GPC4-201ENST00000370828 TLR7Q9NYK1 1049 aaKnown RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 SCOCQ9UIL1 159 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 FRMD4BQ9Y2L6 1034 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 ARHGAP42A6NI28 874 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 TBC1D8O95759 1140 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 TUBGCP2Q9BSJ2 902 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 PPP6R2O75170 966 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 BAG3O95817 575 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 ZAP70P43403 619 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 SLCO1A2P46721 670 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 KIF23Q02241 960 aaPredicted RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 DHX9Q08211 1270 aaKnown RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 HERC4Q5GLZ8 1057 aaPredicted RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 TMCO4Q5TGY1 634 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 EMBQ6PCB8 327 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 PARP9Q8IXQ6 854 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 RRP36Q96EU6 259 aaKnown RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 THOC1Q96FV9 657 aaKnown RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 SYNCQ9H7C4 482 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 MFAP3LO75121 409 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 FTCDO95954 541 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 CABP7Q86V35 215 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 RMI1Q9H9A7 625 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 FAF1Q9UNN5 650 aaPredicted RBP13.95□□□□□ -0.18
GPC4-201ENST00000370828 ADGRL1O94910 1474 aa13.95□□□□□ -0.18
GPC4-201ENST00000370828 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
GPC4-201ENST00000370828 ELAC2Q9BQ52 826 aaKnown RBP13.94□□□□□ -0.18
GPC4-201ENST00000370828 VPS37BQ9H9H4 285 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 PARP2Q9UGN5 583 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 DYTNA2CJ06 578 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 ENO4A6NNW6 628 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
GPC4-201ENST00000370828 POLR2FP61218 127 aaKnown RBP13.94□□□□□ -0.18
GPC4-201ENST00000370828 CAPRIN2Q6IMN6 1127 aaKnown RBP13.94□□□□□ -0.18
GPC4-201ENST00000370828 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 RILPQ96NA2 401 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 POLD4Q9HCU8 107 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 CAPN12Q6ZSI9 719 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
GPC4-201ENST00000370828 DDIT3P35638 169 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 TPD52P55327 224 aaPredicted RBP13.94□□□□□ -0.18
GPC4-201ENST00000370828 SCYL3Q8IZE3 742 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 FNBP4Q8N3X1 1017 aaPredicted RBP13.94□□□□□ -0.18
GPC4-201ENST00000370828 GSDMAQ96QA5 445 aa13.94□□□□□ -0.18
GPC4-201ENST00000370828 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
GPC4-201ENST00000370828 IQCDQ96DY2 449 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 ZMYM6O95789 1325 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms