RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 TGFBRAP1Q8WUH2 860 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 DPF2Q92785 391 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 SHISA4Q96DD7 197 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 COA1Q9GZY4 146 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 GLT8D2Q9H1C3 349 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 IL17RBQ9NRM6 502 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 ADD3Q9UEY8 706 aaKnown RBP11.55□□□□□ -0.56
TPM3-209ENST00000368527 DNAI1Q9UI46 699 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 WTIPA6NIX2 430 aaPredicted RBP11.54□□□□□ -0.56
TPM3-209ENST00000368527 KLRF2D3W0D1 207 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 STXBP3O00186 592 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 RPN1P04843 607 aaKnown RBP11.54□□□□□ -0.56
TPM3-209ENST00000368527 SERPINB2P05120 415 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 CCDC175P0C221 793 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 FECHP22830 423 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 EEF1GP26641 437 aaKnown RBP11.54□□□□□ -0.56
TPM3-209ENST00000368527 MCM7P33993 719 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 AFMP43652 599 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 CDK8P49336 464 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 FAM193AP78312 1265 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 GPSM2P81274 684 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 NONOQ15233 471 aaKnown RBP eCLIP11.54□□□□□ -0.561e-7■■■■□ 26.2
TPM3-209ENST00000368527 COBLL1Q53SF7 1204 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 EARS2Q5JPH6 523 aaKnown RBP11.54□□□□□ -0.56
TPM3-209ENST00000368527 MEX3CQ5U5Q3 659 aaKnown RBP11.54□□□□□ -0.56
TPM3-209ENST00000368527 RRAGBQ5VZM2 374 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 TXNRD3Q86VQ6 643 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 TEX2Q8IWB9 1127 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 FAM114A1Q8IWE2 563 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 TC2NQ8N9U0 490 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 EYA3Q99504 573 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 TMEM47Q9BQJ4 181 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 RAB34Q9BZG1 259 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 TMX4Q9H1E5 349 aaPredicted RBP11.54□□□□□ -0.56
TPM3-209ENST00000368527 DISC1Q9NRI5 854 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 ARGLU1Q9NWB6 273 aaPredicted RBP11.54□□□□□ -0.56
TPM3-209ENST00000368527 OGFRQ9NZT2 677 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 PPP2R2CQ9Y2T4 447 aa11.54□□□□□ -0.56
TPM3-209ENST00000368527 LRRC37AA6NMS7 1700 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.53□□□□□ -0.56
TPM3-209ENST00000368527 BICDL2A1A5D9 508 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 FAM205CA6NFA0 338 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 PSMA7O14818 248 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 NMT2O60551 498 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 GYS1P13807 737 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
TPM3-209ENST00000368527 PBX1P40424 430 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 NAPAP54920 295 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 POTEAQ6S8J7 498 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 SYT10Q6XYQ8 523 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 USP49Q70CQ1 688 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 HEATR3Q7Z4Q2 680 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 TMTC1Q8IUR5 882 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 TMEM139Q8IV31 216 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 IGSF22Q8N9C0 903 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 RASSF8Q8NHQ8 419 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 DHTKD1Q96HY7 919 aaPredicted RBP11.53□□□□□ -0.56
TPM3-209ENST00000368527 THAP9Q9H5L6 903 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 INTS13Q9NVM9 706 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 MYO1AQ9UBC5 1043 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 PCDHA6Q9UN73 950 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 STX8Q9UNK0 236 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
TPM3-209ENST00000368527 PCDHA8Q9Y5H6 950 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 SBF2Q86WG5 1849 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 TAF1P21675 1872 aa11.53□□□□□ -0.56
TPM3-209ENST00000368527 DDX60LQ5H9U9 1706 aaKnown RBP11.52□□□□□ -0.56
TPM3-209ENST00000368527 A0A087X0B3 334 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 A0A1W2PQC6 194 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 hCG_1642624A0A1W2PR95 340 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 TMEM232C9JQI7 657 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 RHOBTB3O94955 611 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 OR52Z1P0C646 297 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 CASQ1P31415 396 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 KCNQ4P56696 695 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 FOXR2Q6PJQ5 311 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 APTXQ7Z2E3 356 aaKnown RBP11.52□□□□□ -0.57
TPM3-209ENST00000368527 CREBRFQ8IUR6 639 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 REXO1L1PQ8IX06 675 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 FLAD1Q8NFF5 587 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 TBC1D16Q8TBP0 767 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 SAMSN1Q9NSI8 373 aaKnown RBP11.52□□□□□ -0.57
TPM3-209ENST00000368527 MAGEC2Q9UBF1 373 aaPredicted RBP11.52□□□□□ -0.57
TPM3-209ENST00000368527 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.57
TPM3-209ENST00000368527 FLT1P17948 1338 aa11.52□□□□□ -0.57
TPM3-209ENST00000368527 EFCAB8A8MWE9 144 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 SMIM22K7EJ46 135 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 ATP8B1O43520 1251 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 MFAP3LO75121 409 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 FGFR1OPO95684 399 aaKnown RBP11.51□□□□□ -0.57
TPM3-209ENST00000368527 TUBBP07437 444 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 ALDH1B1P30837 517 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 DIXDC1Q155Q3 683 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 ZNF827Q17R98 1081 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms